Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03320 ATGGCTGATCTTGTTTCTCTTTCATCTTTTCTGTTCATCTACTTCCTCTCTTCTTTCCAAGATCTCCTCTTTGTTAATGGCGAACCTAACAACAAACCACTTACTCCAATCAATTACGATCTCTATCATTCCAGTGGAAATTTGATGGATGAGATCAAGGCCATGGTTCATCGTCACCCGGATAAACTCAGTATGGAGACAATTAAAGCTGGAAACAGAGGCTATGGTGCTGAGATTGCAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGATAATGCCGAGAGGCCAAAGCTTCGGATCCTTCTTAGTTTTGGACAGCATGGACGGGAGCTGATTACATCAGAACTTGCTTTAAGGATTTTGTCTATTCTTAGTGAAGAAAAAATTCTACCCGACAAGGATGAAGCTTCCTTAAACAGTACACTTGACAAACTTGTAATTAAGGTGGTTCCTATGGAAAACCTTAATGGCCGCAAACTTGTTGAGGGTGGAGATCTCTGTGAGAGAAGAAATGGCAGAGGAGTTGATCTCAACCGGAATTGGAGTGTAGATTGGGGCAAAAAGGAAAAGGATTATGATCCATATGAGGAGAATCCAGGAATCGCCCCATTTAGCGAGCCTGAAAGTCAAATTATGAGGAAACTTGCCATATCTTTTGAACCACATATATGGATCAATGTGCACTCCGGAATGGAGGCTCTTTTTATGCCATATGATCATAAAAATACAACACCTGACGGATTGCCATTGCAACGGATGAAATCGTTGCTTGAAGAAGTAAATCAGCTCCATTGCCAAAAGCGTTGCATGATTGGATCCGGAGGCGGTTCCGTAGGATATTTTGCACATGGGACAGCAACTGATTTCATGTACGATGTTGTGAGGGTTCCTATGGCATTCACCTTTGAGATATACGGTGATGGAACAACTTCGTCAAGAGACTGTTTTAAAATGTTTAATCCCACTGACCTTGCTAGTTACAATAGTGTTCTCAATGACTGGTCTGCAGCTTTCTTTACAATTTTTAAATTGGGGCCACACCAGCTTGGTGAGATCCAATCAAAAGCGTCTGTCTTTAAGTTGGATAAGTTAGTATCAATAGATGAATATCTAGATGGGTATTTGATGGAGAGAAGGAATAGATATGGAAAAAAGATGGAAGTACTTGAACTTGGAATGCAAGAAATAAGAACGTATTACAGGCTATTTTTATTATCTTCAGTTTTACTATTGTGCATGTTCTGTTCTAGAATTTCAAAAACCAAGTGCAGTAGACCAATTGTTTCTGCTATTCCCCTTTAA 1380 0.3717 MADLVSLSSFLFIYFLSSFQDLLFVNGEPNNKPLTPINYDLYHSSGNLMDEIKAMVHRHPDKLSMETIKAGNRGYGAEIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDNAERPKLRILLSFGQHGRELITSELALRILSILSEEKILPDKDEASLNSTLDKLVIKVVPMENLNGRKLVEGGDLCERRNGRGVDLNRNWSVDWGKKEKDYDPYEENPGIAPFSEPESQIMRKLAISFEPHIWINVHSGMEALFMPYDHKNTTPDGLPLQRMKSLLEEVNQLHCQKRCMIGSGGGSVGYFAHGTATDFMYDVVRVPMAFTFEIYGDGTTSSRDCFKMFNPTDLASYNSVLNDWSAAFFTIFKLGPHQLGEIQSKASVFKLDKLVSIDEYLDGYLMERRNRYGKKMEVLELGMQEIRTYYRLFLLSSVLLLCMFCSRISKTKCSRPIVSAIPL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03320 459 Coils Coil 116 118 - -
Car05g03320 459 PANTHER PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B 24 457 - -
Car05g03320 459 PANTHER OS02G0119300 PROTEIN 24 457 - -
Car05g03320 459 Pfam Zinc carboxypeptidase 118 349 IPR000834 GO:0004181|GO:0006508|GO:0008270
Car05g03320 459 SMART zn_carb 42 355 IPR000834 GO:0004181|GO:0006508|GO:0008270
Car05g03320 459 Coils Coil 81 81 - -
Car05g03320 459 SUPERFAMILY Zn-dependent exopeptidases 38 369 - -
Car05g03320 459 CDD M14-CPA-like 123 345 IPR034269 -
Car05g03320 459 Gene3D Zn peptidases 37 352 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03320 - - gmx:100813842 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03320 05 77899167 77903346 Car05g03320 05 77899167 77903346 ECH