Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03297 ATGGAGAAATTGAATTTGTATGGTTTGAGCCATCTCTTCATGACTGTGTTTCTCCATAACTTCTCCACATTCATGGTGCATCCAGCTATCACCGATGTCACAATGGCTGCACTTTGTCCTGGACAAGATGAATGCTCAATTGCCATCTACCTCACTGGTTTTCAACAAGCGATAATAGGAGTGGGAACACTTGTGATGATGCCACTCTTGGGTAATCTCTCAGATAAGTATGGGAGGAAGGCCATTCTCACGGTCCCTATGAGCCTCATGATTATCCCCTTAGGCATATTAGCTTACAGCAGGACGAAAACATTCTTCTACATCTACTACGTATTTAAGATACTCATTAACATGATTTGCGATGGTTGCGTTCCTTGCCTCGCTCTAGCTTACGTCGCAGATAACGTTCCAGAAGGTAGACGAAGCTCTGCGTTTGGAATTCTTTCAGGAATAGGATCTTCTGCATTCGTCTGTGGGACCCTAGCAGCTCGTTTTCTATCCACTGCTCAAACTTTTCAGGTTTCCACTTTTGTTGCGGTGATCGGAGCAGTGTACATGCAAATTTTCCTTCGGGATTCAGTCATCGATGGAAATCATCGCCTCTGTACACCAATCATTTCAGAGGGAGAGCCTTCAACTTCTAAAATCATTGCAAAATCGAAAAGCAATATGCAATTGTTGAATGCGTTGCGTTCTTTGCAGGATCTAACTTCATTCCTTAATAGTAGCTTGACTATAACCCAAGCAGCAATTGTTGCATTCTTCAGCAACCTTGCAGATGTTGGCCTTCATGGTTCAATGATGTATTACTTAAAGGCTCGGTTTCATTTTGATAAGAATCATTTTGCTGACTTAATGGTCATTTCTGGTATTGCAGGGACTGTGTCACAGCTTCTTCTCATGCCTATTTTTGCCCCTACTTTGGGTGAGGCAAGGCTTCTTTCGATTGGACTATTTTTTCACTGTGTACATATGTTCCTTTACAGCATAGCATGGTCCTCCTGGGTCCCTTATGCTGCTGCAATGTTCTCAATTTTGTTTGTTTTTTCTCAGCCATGTATACGAAGTATTGTGTCTAAACAAGTTGATCCCCATGAGCAGGTATCATTTTTATTTTCAATTTTGGCACGAAAAGATATTTCATATAATAAAAGAAAGCCCTTACAATAA 1170 0.4128 MEKLNLYGLSHLFMTVFLHNFSTFMVHPAITDVTMAALCPGQDECSIAIYLTGFQQAIIGVGTLVMMPLLGNLSDKYGRKAILTVPMSLMIIPLGILAYSRTKTFFYIYYVFKILINMICDGCVPCLALAYVADNVPEGRRSSAFGILSGIGSSAFVCGTLAARFLSTAQTFQVSTFVAVIGAVYMQIFLRDSVIDGNHRLCTPIISEGEPSTSKIIAKSKSNMQLLNALRSLQDLTSFLNSSLTITQAAIVAFFSNLADVGLHGSMMYYLKARFHFDKNHFADLMVISGIAGTVSQLLLMPIFAPTLGEARLLSIGLFFHCVHMFLYSIAWSSWVPYAAAMFSILFVFSQPCIRSIVSKQVDPHEQVSFLFSILARKDISYNKRKPLQ 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03297 389 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 8 367 - -
Car05g03297 389 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 8 367 - -
Car05g03297 389 ProSiteProfiles Major facilitator superfamily (MFS) profile. 8 389 IPR020846 GO:0022857
Car05g03297 389 CDD MFS_SLC46_TetA_like 12 367 - -
Car05g03297 389 SUPERFAMILY MFS general substrate transporter 12 367 IPR036259 -
Car05g03297 389 Gene3D MFS general substrate transporter like domains 9 376 IPR036259 -
Car05g03297 389 Pfam Major Facilitator Superfamily 12 374 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03297 Car-Chr5 77673145 77683138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03297 1 343 Organic Solute Cotransporters AT2G16970 43.017 1.50e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03297 - - gmx:100789917 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03297 05 77673145 77683138 Car05g03297 05 77673145 77683138 ECH