Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03296 ATGGATTCTCTTTCTCTTTTCTTCACCGCAGCTCTCTTCGCCGGAGGCCTTTACTGGTTCATCTGTATCCTTGGTCCCGCCGAACAGAAAGGCAAAAGTTTCACAGATCTCTCCGGTGGTTCCATTTCCGCCGAAAAAGTCCAAGACAACTACAAACAATACTGGTCCTTCTTCCGCCGCCCTAAAGAGATCGAAACCGCCGATAAAGTTCCAGACTTCGTCGACACTTTTTACAATTTGGTTACAGATATCTACGAGTGGGGTTGGGGTCAATCCTTTCATTTTTCACCTTCAATCCCTGGTAAATCACACCGTGATGCCACGCGCCTCCACGAAGAAATGGCCGTCGATCTAATCGAGGCTAAATCTGGTGATAAAATCTTAGACGTTGGATGTGGTGTTGGTGGGCCCATGAGAGCTATCGCTTCACACTCACGCGCTAACGTCGttggtattacaataaacgagtatcaggtgaaacgagccaggctacataacaaaaaagctggactcgattctctatgcgacgtcgtttgtggtaattttcttcagatgccgtttcctaataacaccttcgacggcgCGTACTCAATCGAAGCTACGTGTCACGCGCCTAATCTCGAAGAAGTTTACGCCGAGATTTTTAGGGTTTTGAAACCCGGCGCACTTTACGTTTCTTACGAGTGGGTCACGACTGAGAAATTCAAAGCCGATAACGATGAACATGTTGAGATTATTCAAGGGATTGAAAGAGGTGATGCTTTGCCTGGGCTTAGAAGCTATAGTGATATAGCTGAAGCGGCTAAAAAAGTTGGGTTTGAGGTTGTTAAAGAAAGGGATCTGGCTAAGCCGCCGTCTGAGCCGTGGTGGAGCCGATTGAAAATGGGTAGGATTGCGTATTGGCGTAACCACGTTGTTGTAACGGTTTTGTCTGCTTTGGGAATAGCACCTAAGGGTACTGTTGATGTTCATGAGATGCTCTTTAAGACTGCTGATTTTTTGACTAGAGGGGGTGATTCTGGAATTTTCTCTCCTATGCATATGATCCTTTGCAGAAAACCTGATGAAGATGATAAATGA 1080 0.4037 MDSLSLFFTAALFAGGLYWFICILGPAEQKGKSFTDLSGGSISAEKVQDNYKQYWSFFRRPKEIETADKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEAKSGDKILDVGCGVGGPMRAIASHSRANVVGITINEYQVKRARLHNKKAGLDSLCDVVCGNFLQMPFPNNTFDGAYSIEATCHAPNLEEVYAEIFRVLKPGALYVSYEWVTTEKFKADNDEHVEIIQGIERGDALPGLRSYSDIAEAAKKVGFEVVKERDLAKPPSEPWWSRLKMGRIAYWRNHVVVTVLSALGIAPKGTVDVHEMLFKTADFLTRGGDSGIFSPMHMILCRKPDEDDK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03296 359 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Car05g03296 359 CDD AdoMet_MTases 126 230 - -
Car05g03296 359 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Car05g03296 359 Gene3D Vaccinia Virus protein VP39 44 308 IPR029063 -
Car05g03296 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 355 IPR029063 -
Car05g03296 359 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 356 - -
Car05g03296 359 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Car05g03296 359 PANTHER - 1 356 IPR044625 GO:0008168|GO:0032259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03296 Car-Chr5 77662260 77663924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03296 116 222 Acyl Lipid Metabolism Gene Families AT1G73600 31.776 3.36e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03296 K08242 - gmx:100804517 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03296 05 77662260 77663924 Car05g03296 05 77662260 77663924 ECH