Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03289 ATGATTCTAATCATACTATGTGTCGTTCTAAATATTAATTATCATATAAATGTCATGAGGAGGATGGAGATGAAGGATGGAACTCGAGCTCCGGTGAGTAATAATGGTTATTTTGGTGGGGAACAAATATCAACCTCTAAATTCTCACAACTTCTTGCTTCCAGTCATCGTGATTTTCTTCTATCTCCAACTGGAGCTCAGGTGAAAGTTTCAGAACTGGAGGGAAAAGTAGTGGGTCTATTATTCGCAGCCAATTGGTACCCACCATGTCGTGTATTCACCCAATTACTAATTGGAATCTACGAGGAGCTGAAAACTAACAACCCTCATTTTGAAATAGTGTACGTGTCCTCTGATGAAGACTTAGATGCTTTTAATGAGTTCTACAAAAACATGCCGTGGCTTGCAATTCCATTCTATGATTTGGAAACAAAAAAATCATTGAATAGAAAATATGAAGTGGAAGGTATTCCATGTTTAATTATGTTGCAACCTAGTAAAGTGGATGATGCAACAACACTTCGTCATGGTGTTGAACTTATTTATCGATATGGTGTTCAAGCTTATCCATTTAGTAATGAGAGATTGATGGAATTGCACGAGGCAGAGAGAGAGAAGCGTGAAAATCAAACACTTATTAATTTACTTGCTAACAATTTTAGAGACTATGTTTTGAGTCAAACTCACACGGGACTATTCACACAGGTACCTATTGCTTCTTTAGTGGGTAAGACAATTGGACTATACTTCTCAGCCGGGTGGTGCGTACCATGCACAAAATTCACCCCAAAATTGATTTCCGTTTATGAAAAGATCAAACAAGAGCTAACTGAAAAAGGAGATAATGAAGACTTTGAAATTGTGCTAGTTTCCAACGACCGTGACCAAGAATCTTTTGACTCTTACTACAATACTATGCCTTGGTTAGCATTGCCTTTTGGAGACCCAGAAATAAAGAACCTTGCAAGACACTTTGATATACAAGGGATTCCTTGTTTGGTAATTATAGGTCCTGATGGTAAAACAATAACAATACATGGAAGAAATTTAATAAACTTGTATCAAGAAAATGCTTACCCTTTCACTAAGGCCAAAGTTGAGCAACTAGAGAAACAACTTGAAGAAGAGGCTAGAGACCTTCCAATTTTGGTGCATCATGTAGGACACCATCATGGATTGAATTTAGTGTCGGATGGAAATGGGGGAGGACCCTTTATTTGTTGTGTGTGTGATGAGCAAGGCTCTAATTGGGCCTACCAATGTCTTCAATGTGGCTATGAAGTGCATCCAAAATGCATCAAAACCGTGCATGTGCATGTGCATGGACCGTGA 1332 0.3836 MILIILCVVLNINYHINVMRRMEMKDGTRAPVSNNGYFGGEQISTSKFSQLLASSHRDFLLSPTGAQVKVSELEGKVVGLLFAANWYPPCRVFTQLLIGIYEELKTNNPHFEIVYVSSDEDLDAFNEFYKNMPWLAIPFYDLETKKSLNRKYEVEGIPCLIMLQPSKVDDATTLRHGVELIYRYGVQAYPFSNERLMELHEAEREKRENQTLINLLANNFRDYVLSQTHTGLFTQVPIASLVGKTIGLYFSAGWCVPCTKFTPKLISVYEKIKQELTEKGDNEDFEIVLVSNDRDQESFDSYYNTMPWLALPFGDPEIKNLARHFDIQGIPCLVIIGPDGKTITIHGRNLINLYQENAYPFTKAKVEQLEKQLEEEARDLPILVHHVGHHHGLNLVSDGNGGGPFICCVCDEQGSNWAYQCLQCGYEVHPKCIKTVHVHVHGP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03289 443 Coils Coil 359 379 - -
Car05g03289 443 ProSiteProfiles Thioredoxin domain profile. 24 211 IPR013766 -
Car05g03289 443 SUPERFAMILY Thioredoxin-like 233 345 IPR036249 -
Car05g03289 443 ProSiteProfiles Thioredoxin domain profile. 214 378 IPR013766 -
Car05g03289 443 Coils Coil 199 219 - -
Car05g03289 443 PANTHER THIOREDOXIN 45 432 - -
Car05g03289 443 Pfam Thioredoxin-like 243 341 IPR012336 -
Car05g03289 443 Pfam Thioredoxin-like 75 166 IPR012336 -
Car05g03289 443 SUPERFAMILY Thioredoxin-like 61 165 IPR036249 -
Car05g03289 443 ProSitePatterns Zinc finger C2H2 type domain signature. 421 441 IPR013087 -
Car05g03289 443 Gene3D Glutaredoxin 51 192 - -
Car05g03289 443 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 388 440 IPR002219 -
Car05g03289 443 SUPERFAMILY Cysteine-rich domain 377 441 IPR046349 -
Car05g03289 443 Gene3D Glutaredoxin 227 364 - -
Car05g03289 443 Pfam C1 domain 389 433 IPR004146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03289 Car-Chr5 77610032 77614638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03289 K17609 - gmx:100808125 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03289 05 77610032 77614638 Car05g03289 05 77610032 77614638 ECH