Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03274 atggatcaaataaatacactaattTTTTCCTTTTTCCTTATAACATTTCATCTTTCATCATCAACGGTATTATCAACTACATTCACATTCGTTAATAAATGCGATTACACAGTTTGGCCGGGAATTCTCTCCAACGCCGGAGTTGCACCGCTTTCAACCACCGGATTCGTTCTTCAATCTGGCGACTCCAAATCCATTACTCCACCAGCTTCTTGGGGAGGTCGCTTCTGGGGCCGCACACTCTGTTCACAAGACTCCACCGGAAAATTCACCTGCGTCACCGGCGATTGTAACTCCGGCAGACTTGAATGCTCCGGCAACGGAGCAACACCACCAGCTACCTTAGCGGAATTCACTCTTGACGGCTCCGGTGGACTCGATTTCTTCGACGTGAGTTTGGTCGACGGTTACAACGTTCCTATGCTGGTTGTTCCACAAGGTGGCTCCGGTGATAACTGCACAAGTACTGGTTGCGTTGGAGATCTTCTTAGCGCGTGTCCATCAGAGCTTAAAGTTACGAGCGTGGATGGGAAAGAGAGCGTGGCGTGTAAAAGTGCTTGTGAAGCGTTTGGGTCGGCGCAGTATTGTTGTAGCGGCGCGTATGGTTCGCCTAACACTTGCAAGCCTTCAAGTTACTCGGAGATTTTCAAGAATGCTTGCCCACGCGCGTATAGCTACGCGTACGACGATAAAACAAGCACGTTTACATGTGAATCTGCTGCTGATTACACCATCACGTTTTGCTCTTCTACCACTAACGGTAACGGTAACAGTCCAAGTCAGAAATCGTGGCAGGGACAAAATCCGAAATTAGATGGCAGTGGTGCTCCCAATTCTAAGACACCACAGCTTAACAACGGTTCAATGGTGTATGTTGGTGCCATAGATCAAAGTGAAATATCATGGTCCTCTAGTACCTATCTGTGGGAATCCCAACTCATTCTCACCATCACAACGGCTATTTGGCTCTTGTGTCACCTCTTCTAG 987 0.4711 MDQINTLIFSFFLITFHLSSSTVLSTTFTFVNKCDYTVWPGILSNAGVAPLSTTGFVLQSGDSKSITPPASWGGRFWGRTLCSQDSTGKFTCVTGDCNSGRLECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVVPQGGSGDNCTSTGCVGDLLSACPSELKVTSVDGKESVACKSACEAFGSAQYCCSGAYGSPNTCKPSSYSEIFKNACPRAYSYAYDDKTSTFTCESAADYTITFCSSTTNGNGNSPSQKSWQGQNPKLDGSGAPNSKTPQLNNGSMVYVGAIDQSEISWSSSTYLWESQLILTITTAIWLLCHLF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03274 328 PANTHER BNAA02G17480D PROTEIN 12 275 - -
Car05g03274 328 Pfam Thaumatin family 32 248 IPR001938 -
Car05g03274 328 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Car05g03274 328 PANTHER OS03G0233200 PROTEIN 12 275 IPR001938 -
Car05g03274 328 ProSiteProfiles Thaumatin family profile. 25 248 IPR001938 -
Car05g03274 328 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
Car05g03274 328 MobiDBLite consensus disorder prediction 254 284 - -
Car05g03274 328 SMART tha2 28 249 IPR001938 -
Car05g03274 328 Gene3D Thaumatin 26 248 IPR037176 -
Car05g03274 328 CDD TLP-PA 27 248 - -
Car05g03274 328 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Car05g03274 328 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Car05g03274 328 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Car05g03274 328 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03274 Car-Chr5 77472373 77475472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03274 11 265 Receptor kinase-like Gene Family AT5G38280 50.566 4.74e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03274 - - gmx:100780102 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03274 05 77472373 77475472 Car05g03274 05 77472373 77475472 ECH