Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03268 ATGCGCTTCAAACTGAATTCCAGTTATATGAATAATAAGGACAACCTTGCAATATACTATGTGGTGATACCTTGTTTCGTACTTTCTTTGCTCATTCATCCAACAACCCGGCATCATACAGTTAACAGGATTCTCTGGGCTTTTTGTGTTTATCTTGAAGCTGTGTCTGTTCTCCCTCAGTTGTGGGTCATGCAGAACACTAAGATTGTTGAACCATTCACAGCACACTATGTTTTTGCCCTTGGAGTTTCAAGGTTCTTGAGTTGTGCACATTGGGTCCTCCAGGTTTTGGATACCCGCGGACGCCTACTAACTGCTTTGGGTTATGGATTGTGGCCTTCTACGGTACTTGTATCAGAAATTGTCCAGACCTTCTTCATACTAGCAGATTTTTGCTACTACTATGTCAAGAGCCTTGTTGGGGGACAACTTGTTATCCGTCTTCCTTCAGGAGTGATTTGCTCGTTCTTGCTTCTCCGAATTCTCCTCTACAACATTACCATCTCTCCCTCTCTACTGGGGTTGCTAGTAGATGTCTAG 540 0.4333 MRFKLNSSYMNNKDNLAIYYVVIPCFVLSLLIHPTTRHHTVNRILWAFCVYLEAVSVLPQLWVMQNTKIVEPFTAHYVFALGVSRFLSCAHWVLQVLDTRGRLLTALGYGLWPSTVLVSEIVQTFFILADFCYYYVKSLVGGQLVIRLPSGVICSFLLLRILLYNITISPSLLGLLVDV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03268 179 PRINTS ER lumen protein retaining receptor signature 82 100 IPR000133 GO:0006621|GO:0016021|GO:0046923
Car05g03268 179 PRINTS ER lumen protein retaining receptor signature 68 82 IPR000133 GO:0006621|GO:0016021|GO:0046923
Car05g03268 179 PRINTS ER lumen protein retaining receptor signature 46 66 IPR000133 GO:0006621|GO:0016021|GO:0046923
Car05g03268 179 Pfam ER lumen protein retaining receptor 1 94 IPR000133 GO:0006621|GO:0016021|GO:0046923
Car05g03268 179 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 152 IPR000133 GO:0006621|GO:0016021|GO:0046923
Car05g03268 179 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03268 Car-Chr5 77437227 77439206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03268 1 153 Miscellaneous Gene Families AT4G38790 78.431 1.84e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03268 - K10949 gmx:100787747 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03268 05 77437227 77439206 Car05g03268 05 77437227 77439206 ECH