Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03260 ATGGAAATTGAAGAACCCATGATGAAGTCTAGGTTCACACGCATCTGTGTTTACTGTGGCAGCAGTCCTGGAAAGAATCCTAGCTACCAAATTGCTGCAATTCAGCTCGGAAAACAACTGGTGGAGAGGAATATTGACTTGGTTTATGGAGGAGGAAGCATAGGTTTGATGGGTCTAATCTCACAAGTTGTTTATGATGGTGGACGCCACGTGTTAGGAGTCATTCCCAAGACACTTATGCCAAGAGAGATCACTGGAGAGACTGTAGGAGAAGTAAGAGCTGTATCGGGGATGCACCAACGCAAAGCCGAAATGGCTCGACAAGCAGATGCATTTATTGCCTTGCCAGGTGGATATGGCACCCTGGAAGAACTACTAGAAATTATTACATGGGCTCAATTAGGTATCCATGATAAACCGGTGGGGCTATTGAACGTGGATGGGTACTACAACTCGCTGTTGGCATTCATGGACAAAGCTGTAGACGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTATCTGCCCAAACTGCCCTAGATCTCATGTGCAAACTTGAGGAATATGTCCCTAAGCACTGTGGTGAGGGCCCCAAACTAAGTTGGGAGATGGAGCAACAATTAGTTAACACAGCAAAGTCAGATATTTCTCGTTGA 660 0.4561 MEIEEPMMKSRFTRICVYCGSSPGKNPSYQIAAIQLGKQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTALDLMCKLEEYVPKHCGEGPKLSWEMEQQLVNTAKSDISR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03260 219 Pfam Possible lysine decarboxylase 57 184 IPR031100 -
Car05g03260 219 Gene3D - 3 189 - -
Car05g03260 219 PANTHER LOG FAMILY PROTEIN YJL055W 7 215 - -
Car05g03260 219 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 7 215 - -
Car05g03260 219 TIGRFAM TIGR00730: TIGR00730 family protein 14 190 IPR005269 GO:0009691|GO:0016787
Car05g03260 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03260 Car-Chr5 77370339 77372496 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03260 K22522 - gmx:100782787 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03260 05 77370339 77372496 Car05g03260 05 77370339 77372496 ECH