Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03252 ATGAGAGAAACGACGACGTCAATCGTGGAAGTTGGAGAGGACCAAGGAAACGCGGTTCCTCATTCAAATGGCGGGGAAGAAAGAATTTTTGTTGCGATTAGAGTAAGGCCTTTGAACGAGAGAGAAAGAACGAGACATGATGTGTCAGAGTGGGAATGTGTTTCACATAACACCATCAGATTCAAGAACAGTGGCCATGCAGAACAGCGATCGTTGGCGGATACATATACATTTGATACGGTATTTGGGGAAAAGTGTCCCACTAAACAGGTGTATGAGCAAGGGATTAAGGAAGTTGCCCTTTCAGTCGTTAGGGGTATCAATTCTAGCATTTTCGCATACGGGCAAACAAGCAGTGGAAAGACATATACCATGACTGGAATTACTGAACTTGCAGTAAAGGATATATATGAATACATAGAGAAGCATAAAGAAAGAGAGTTTGTTGTGAAGTTCTCTGCCTTGGAAATATATAATGAAGCTGTGAGAGACCTTCTCAATTCAAATGCTACCACACTAAGACTTCTAGATGATCCAGAGAAAGGGACCATTGTTGAGAAACTTACAGAGGAGACTCTTACTGAGAGAAGCCGGTTGCAGCAACTTATTTCAAAATGTGCAGCTGAAAGGACAACCGAAGAGACTGCCATGAACGAAACAAGCTCCAGATCTCATCAAATTCTTCGACTGACAGTTGAAAGCAATCCTAGTGATTTTGTAGGCGCTGCAAGATCTGGCGCTCTTTTTGCCAGTGTGAATTTTGTTGATCTAGCAGGAAGTGAACGTGCTTCTCAAGCATTATCAGCAGGCACAAGATTGAGAGAAGGTAGCCACATAAATCGCAGTTTACTGACCCTTGGAAGTGTAATTAGGAAACTGAGCAAGGAAAGAAATGGACACATACCTTACAGAGATTCCAAGCTTACTCGCATTCTGCATAACTCTTTAGGAGGCAATGCCAGAACAGCCATCATTTGTACCATTAGCCCTGCACGCAGCCAGGTTGAGCAATCAAAAAATACTCTATTTTTTGCTGGTTGCGCAAAACAGGTGACTACCAATGCTCGGGTCAATGAAGTGATGTCAGACAAGGTTTTGGTAAAGCAACTGCAGAAGGAACTGGCTAGAATGGAGAATGAGTTGAGGAGCTTAAATACCATTGTTCTTAAGGAAAGGGAACTTCAGATTGAACAGATGGATAAGGAGATCAAAGAACTGACTCGGCAACGTGATGTCTTTCAATCTCATGTTGAAAGTTTGCTCCAATCAGCTGGGAAAGACCAGGTTATAAAAGTAGATCAAGATTGGGCCTCAGAGTCCGGTGTTGCTAATGATCCTCGTCCAGGGACAGAAACCGCTTATGAGAATCTTGACAGAACAACATCCAGTTCGTCTATTTCCAATGAGCACCTTTTTAAGCAATCTGAAAATTCTGAAGACAACTTTCTCTTGGATGGTTGTCCTCCCACATTTGGCGGGCCTGATCCATGTCAAGGTTGGGAGGAGATGACTAGCAAAGCTAAATCTGAAGATAACTGTGAGGAAGTACCGTGCATTGAAATCAAAGAAGTGGAAACAGAGTACAAAACAGATATTAATATCATTCCAGCTTTTGAAGAAAGAGAAGAAAATTCACCCATGATTCAAGTTGTGGAGATAGATGGTAAGTCATCCTCAGGGAATGGGCACAGTGATCTGGATGCTCCTCAGCAAAACACTGAGGACGTTAAAAGGACCAACAGCCATCTTGTGGACCTCTTAGAGAAATCTAGTGACTCATTTGAATCTGAACCTCGTTGCTTGGATGCCATGTCTCCTCCTGAGACAGATAAGGTGGATCAGGAAAATTCATGGCAGCCTCGGTTCAGTGAGTTGAAGCAAAATGTGTGTCCTCTGTATAATAAGCTAGACCAGGAACCTACAAGACCTCATCGGTCTGATGAGCAGGAGCTTAAAACGGTGTCACCTCCTCAACTTGATGATCTGGAACAAGTATCGTTCCCATCACCAGCTGGTGTTGAAAAGGAATATTCTACTAGTTTGGTTTGCTCTCCTGCAAAGCTATCTGAACCTAAGTTACATGCTAAAAGAAGAAAATCTTCCAGAAAATCTTCTCTGATTCACAAGATGAATGCTTCAGCGGAAGATGCAGAATCTTCTAAGGATTCTGATAACGAGGAAACTGCCAGCGTCCTCAACTTTGTCGTAAAAATGAACGAAAAGGCTAAGCATAAGCCAAAGTCAGTAGATAGTGACTTTGATAATCTTATGGTACCTGTGAGGACGCATGGAATCAATCAAAATGTGAGCAGAGGAAAAGGTGTCAGATCCCCCGGAAAGTGGGGGGCTTTAATACCCTCTAAATTTGAGATGCAGCAGAGAGATATAATTGAACTTTGGGATGCATGCTATGTGCCACTGGTACATAGATCCTATTTTTTCCTTCTCATCAAAGGTGAACTTTCGGATTCTGTGTACTTGGATGTAGAGCTCAGACGTTTGTCCTTTTTAAAGGACGCTTTTTCTTGCGGAAATTACACTCCAGGAGAAGGTCTTGACGTCACACCTAATTCAAGCATGTTGTCTCTGACTCATGAGAGGAAAATGCTGAGTAAGCAAGTGCATAAAAAGTTTTCGAGGAGGGGAAAAGAGGAACTATACCTGAGATGGGGTATTGATTTGAAGACTAAGCACAGAAGTATACAATTGGCATGGCTCGTATGGACGGATACAAGAGATTTGAACCACGTAAGAGAAAGTGCTGCGCTTGTTGGGAAGCTGCTTGAGAAAGAAAAAAGAGACATTTCAGCAGAACTGACTTTAAATTCAGGCTTATTTTTTCCGCTTGCTGTGTCATATGAGAAAAACCCTTTGTTGCAAATCATGGTTGATACGTGA 2898 0.4237 MRETTTSIVEVGEDQGNAVPHSNGGEERIFVAIRVRPLNERERTRHDVSEWECVSHNTIRFKNSGHAEQRSLADTYTFDTVFGEKCPTKQVYEQGIKEVALSVVRGINSSIFAYGQTSSGKTYTMTGITELAVKDIYEYIEKHKEREFVVKFSALEIYNEAVRDLLNSNATTLRLLDDPEKGTIVEKLTEETLTERSRLQQLISKCAAERTTEETAMNETSSRSHQILRLTVESNPSDFVGAARSGALFASVNFVDLAGSERASQALSAGTRLREGSHINRSLLTLGSVIRKLSKERNGHIPYRDSKLTRILHNSLGGNARTAIICTISPARSQVEQSKNTLFFAGCAKQVTTNARVNEVMSDKVLVKQLQKELARMENELRSLNTIVLKERELQIEQMDKEIKELTRQRDVFQSHVESLLQSAGKDQVIKVDQDWASESGVANDPRPGTETAYENLDRTTSSSSISNEHLFKQSENSEDNFLLDGCPPTFGGPDPCQGWEEMTSKAKSEDNCEEVPCIEIKEVETEYKTDINIIPAFEEREENSPMIQVVEIDGKSSSGNGHSDLDAPQQNTEDVKRTNSHLVDLLEKSSDSFESEPRCLDAMSPPETDKVDQENSWQPRFSELKQNVCPLYNKLDQEPTRPHRSDEQELKTVSPPQLDDLEQVSFPSPAGVEKEYSTSLVCSPAKLSEPKLHAKRRKSSRKSSLIHKMNASAEDAESSKDSDNEETASVLNFVVKMNEKAKHKPKSVDSDFDNLMVPVRTHGINQNVSRGKGVRSPGKWGALIPSKFEMQQRDIIELWDACYVPLVHRSYFFLLIKGELSDSVYLDVELRRLSFLKDAFSCGNYTPGEGLDVTPNSSMLSLTHERKMLSKQVHKKFSRRGKEELYLRWGIDLKTKHRSIQLAWLVWTDTRDLNHVRESAALVGKLLEKEKRDISAELTLNSGLFFPLAVSYEKNPLLQIMVDT 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03252 965 MobiDBLite consensus disorder prediction 554 577 - -
Car05g03252 965 MobiDBLite consensus disorder prediction 578 596 - -
Car05g03252 965 MobiDBLite consensus disorder prediction 636 665 - -
Car05g03252 965 CDD KISc_CENP_E 29 351 - -
Car05g03252 965 Pfam Kinesin motor domain 34 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g03252 965 SMART kinesin_4 26 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g03252 965 ProSiteProfiles Kinesin motor domain profile. 28 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g03252 965 Coils Coil 360 416 - -
Car05g03252 965 MobiDBLite consensus disorder prediction 691 726 - -
Car05g03252 965 PRINTS Kinesin heavy chain signature 251 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g03252 965 PRINTS Kinesin heavy chain signature 215 232 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g03252 965 PRINTS Kinesin heavy chain signature 106 127 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g03252 965 PRINTS Kinesin heavy chain signature 301 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car05g03252 965 PANTHER KINESIN-LIKE PROTEIN KIN-7J 23 930 - -
Car05g03252 965 Pfam Domain of unknown function (DUF3490) 788 933 IPR021881 -
Car05g03252 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 386 IPR027417 -
Car05g03252 965 MobiDBLite consensus disorder prediction 1 23 - -
Car05g03252 965 Gene3D Kinesin motor domain 20 383 IPR036961 -
Car05g03252 965 MobiDBLite consensus disorder prediction 554 617 - -
Car05g03252 965 PANTHER CENTROMERE PROTEIN E 23 930 - -
Car05g03252 965 ProSitePatterns Kinesin motor domain signature. 250 261 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03252 Car-Chr5 77256361 77263373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03252 26 421 Miscellaneous Gene Families AT5G06670 38.614 1.41e-77 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03252 K11498 - gmx:100802097 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03252 05 77256361 77263373 Car05g03252 05 77256361 77263373 ECH