Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03247 ATGACGATGGGAGCTCTTGCTACATTCCCCCCTTGGACTCCCGAAGATGATCTTTTGCTCAAGAACGCCGTTGAGGCTGGTGCTTCCTTGGAGTCACTTGCCAAAGGCGCGGTGCAGTTTTCTCGTAAATATAGTTTCGGGGAAATACGTGACAGGTGGTATTCTCTCCTCTATGATCCTGTTATATCCTTGGAAGCTTCTATATGTATGGCGAATTTCGAGCTTTCTGCTTCGCCTCTACCATCAAAGTTCTTTAAATTTGGACAATCGAAAGAACAGAAAATTGTTTCTGTTAAGAGAAAAGCTGACAGCGTTCGAACTTCTTATTATGCTATGTGTAAAAGAACTCGCCATGATACGCTAGATTTCAAGGACTTCAATTTTCTAGTCGATCCAGAGAATGGGAATTGTGTGGTAAATGGAAATGAGCCTTTGCCGGAAACCTGCGAACCCGAGTGTCCAACTTTGAACCACTTTTCAAATGTTGATCCGCCACACTATGACCTTCCAGAAAATACAATAGATGTTGACGTTGCATTTAATGGAGTTACGGCTAATGGATTTTATACTGGAGTTGATGAGAATTTCCCCATTGACCAAATAAATATAACTGAGGAAGAATCTCAAATTCTTGAAGATAATGTGCCTTTGACTGGAGCTGCCGACGAATTGGCCGATCCAGTAGACTTGGATTTAGATAACTTGATCACAGATGAAGTTTTACAGGAAATGTCTATGTCTGCATTTGGTCAAATAAACAACGGCCCTGCAAATTTGCGCTCCGAGTATGGTGAAGATTATAATATGTTTGATTCACCCGAGTTAGACTGTGGAAATTCATTTGACAACTTACAGTTATCTTCACTTCCTGATGTGTCGGTCTGGAGAGCAGAAGAACCTGATATTCGATGTGGAAGTTTGAAAGATTCCCTTGCTTGCGAGGAGGGTTATCTGGAAGAACTGTCCAATTCACTCTTAAACTTCACAGGTGATGAAGAGCTATTTCTGATGGATGCCGTCGGAAAAGATGGGATTGATAAATCTTATTATGATGGTCTTAGTTCACTTTTACTAAATTCTCCAATTGCTGATTGTCCAGATCAGATACATGAAAAGGATGAAACAGAGTTATTATTGACCTCACATGCAGATGTTAGAAATCCATCTGTTTCTTGTCGTGCCGAAGTAGATAACAACGCAAGGAAGGCTGAAACAGATTTGTTGGTGGCCTTTGATGCACATTTAAGAGATCCGCCAGTTTCATGTCGTGCAGAAGTAGATGACATTGCAGCGTCGCAAGCTAATGGTGTGCAAGTAGTTAAATTGGAATTCCAAATGCCAACTTCTGCCTCAGTTAAAGACCCTCGGTTTCCTGAACTAACTAATGGAGTTATTGTCTGTACATTAAATACCGAGGACCCAGTAGTTCCATCCAATGATGATGTTTTCCTACCCTTTAATGAGCCTCCTCCAACAATTTCCTATTCACCTAAATCAGCTTCTAGAAAATCCAATAAACCAGTTGCATCATCTGTTAATGATTATGGATATAAGGCTAGTGGAAGAGGTAAAGTTTTGATGCAGGTTGAACATAACAACTCAATAGGATTAGGAGCTTGTGCATCTTCTCAGGCAACGGGATCCCGGGGCCTTGCAGAACCTGTTTATGGTTCTAAGATGAAACGCAAGTTGTCTAATGGTCATGAATCACACACACCGTCTAGAAGTGCAGTTATTTCTTCTGGCGGCTTAGGTGGAAACAATAATGCAACAAACACAAACCATGGTCCTCTACATGCAAATCCCAAGGAAAAGCTTCTCCGTGTTTGCTCTGGAAAGCAACTAAGCAATAATATGACAAAATTTTCACATGATAAACCAGCACTTGGAAATGGCTTCAGAAATCATGTCCAACCTAATGGTTCTAGCTTGATACAGGAACAACATGCAGCTTTGCCACTTGAAGATTATCAATTGCAACATGCTGAAACGGGATCCTCAGACGTTATGCAGTCAGAGCTGGTGGTTAATCCTCAAAAGTTAGACGAGGATCAAAAGTTAGATGAGGAGGAGCAATATATCGAAAGCGATGATGATGTTCCCTATTATTCTGATGTAGAGGCGATGGTACTTGATATGGACTTGGATCCCGACGATCACGATTTATATGATAATGAAGAAGTATCAAGATATCAGCACGAGGAATCGAAGCGGGCTATAATAAGGCTGGAACAGGGTACTCATTCACATCTGCAGCGAGCTATGGCTTCACATGGAGCATTGGCCATGTTATATGGTCGCCACTCAAAGCATTACATCAAGAAAACTGAGGTTTTACTTGGACGAGCAACAGAAAGTGTTCATGTAGATATTGACTTGGGTAAAGGAGGGTGTGCCCATGCAATATCTAGACGTCAGGCAATTATAAAGATGGATATCGATGGATCGTTCTACATTAAAAATATTGGCAAGAGTATAATGCTGGTAAATCACAAAGAATTGCACACTGGTCAATCTCAAAGACTGCATCCCAGTTATCTGATTGAGTTGAAGGGCACAGCATTCATATTTGAGACAAATCAAAGTCGTTTGAAGCAGTAG 2601 0.411 MTMGALATFPPWTPEDDLLLKNAVEAGASLESLAKGAVQFSRKYSFGEIRDRWYSLLYDPVISLEASICMANFELSASPLPSKFFKFGQSKEQKIVSVKRKADSVRTSYYAMCKRTRHDTLDFKDFNFLVDPENGNCVVNGNEPLPETCEPECPTLNHFSNVDPPHYDLPENTIDVDVAFNGVTANGFYTGVDENFPIDQINITEEESQILEDNVPLTGAADELADPVDLDLDNLITDEVLQEMSMSAFGQINNGPANLRSEYGEDYNMFDSPELDCGNSFDNLQLSSLPDVSVWRAEEPDIRCGSLKDSLACEEGYLEELSNSLLNFTGDEELFLMDAVGKDGIDKSYYDGLSSLLLNSPIADCPDQIHEKDETELLLTSHADVRNPSVSCRAEVDNNARKAETDLLVAFDAHLRDPPVSCRAEVDDIAASQANGVQVVKLEFQMPTSASVKDPRFPELTNGVIVCTLNTEDPVVPSNDDVFLPFNEPPPTISYSPKSASRKSNKPVASSVNDYGYKASGRGKVLMQVEHNNSIGLGACASSQATGSRGLAEPVYGSKMKRKLSNGHESHTPSRSAVISSGGLGGNNNATNTNHGPLHANPKEKLLRVCSGKQLSNNMTKFSHDKPALGNGFRNHVQPNGSSLIQEQHAALPLEDYQLQHAETGSSDVMQSELVVNPQKLDEDQKLDEEEQYIESDDDVPYYSDVEAMVLDMDLDPDDHDLYDNEEVSRYQHEESKRAIIRLEQGTHSHLQRAMASHGALAMLYGRHSKHYIKKTEVLLGRATESVHVDIDLGKGGCAHAISRRQAIIKMDIDGSFYIKNIGKSIMLVNHKELHTGQSQRLHPSYLIELKGTAFIFETNQSRLKQ 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03247 866 Pfam FHA domain 779 850 IPR000253 GO:0005515
Car05g03247 866 Pfam N-terminal region of micro-spherule protein 12 102 IPR025999 -
Car05g03247 866 PANTHER MICROSPHERULE PROTEIN 1 3 865 IPR037912 GO:0002151|GO:0031011|GO:0071339
Car05g03247 866 SUPERFAMILY SMAD/FHA domain 770 859 IPR008984 GO:0005515
Car05g03247 866 ProSiteProfiles Forkhead-associated (FHA) domain profile. 778 834 IPR000253 GO:0005515
Car05g03247 866 Gene3D - 723 866 - -
Car05g03247 866 MobiDBLite consensus disorder prediction 562 600 - -
Car05g03247 866 PANTHER FHA DOMAIN PROTEIN 3 865 - -
Car05g03247 866 CDD FHA 774 859 IPR000253 GO:0005515
Car05g03247 866 MobiDBLite consensus disorder prediction 570 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03247 Car-Chr5 77231088 77236640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03247 - - cam:101513703 1697.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03247 05 77231088 77236640 Car05g03247 05 77231088 77236640 ECH