Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03235 ATGGAGGCCGTAAAGATCAACAAGAAGATTATTAATATTCTGTTAACGATTGCCGTATGCCGTTTAATATTAACGGTGGAGTCTACATTAACGGAGATCCTCGACGTAGGACTAGAGGGAGAAGTGAGTGTGAAAGAGTCTGAACTGGAAGCGGTTTCCTTGGATTTCGGGAGGTTAAGCAGTAGAGGAGAAGCGTTAGCAGTTGTACGGCCAAGGTCAGCAGATGACGTGGCAAAGGTTGTTAGAGCGGCGTATGAATGGCCGTGTTTTGCTGTGTCGGCTAGAGGGCACGGACATTCAATAAACGGACAAGCGGATACGAGGGTGAAAGGGGTGGTGATTGAAATGGGGAAGGGGGGTGTAGAAAGTAGTAATAATCCTCCTCGTGTTTGGGAGAAAGAAATGTATGTGGATGTTTGGGGTGGTGAATTGTGGATACATGTCTTGAAGGCAACATTGGAGTATGGTTTGGCACCCAAGTCTTGGACTGATTACTTGTATTTGTCTGTCGGTGGTACTTTGTCTAATGCTGGTATTAGTGGACAAACCTTTAATCATGGTCCTCAAATCTCCAATGTTTTTCAACTTGATGTCGTTACAGGAAAGGGTGAGGTGTTGACGTGTTCTGAAGATCGTAATTCAGATTTGTTCCATGCTGTTCTTGGTGGTCTTGGACAATTTGGAATCATCACTAGAGCGAGAATTGCTCTCCAACCAGCTCCTCAAAGAGTTCGTTGGATACGAGTTTTGTACTCCAACTTTTCAACCTTTTGTAAGGATCAGGAGTTTCTAATATCTTTGCATGGGAAACCAGCGACCCAAAGATTTGATTATGTTGAAGGTTTTGTGATAGTTGATGAAGGACTCATTAATAATTGGAGGTCCTCTTTTTTTTCACCTAGTAATCCAGTTAAAATCAGTTCCCTTAATGCTGATGGAGGTGTTTTGTATTGTTTGGAGATTACCAAAAACTACCACCAAGGAAATGCAGATTCTGTTGATGAGGAAATACAACCTCTATTGAAAAAGTTAGATTTTATACCAAAATCAGTGTTTACAACGGATCTGCCTTATGTGGATTTTCTGGACCGTGTACATAAGGCAGAACTCAAACTTAGATCCAAGGGTTTATGGGACGTCCCCCATCCATGGCTCAATCTTTTTATTCCAAAATCAAGAATAGAAGACTTTGACAAGGGTGTGTTCAAGGGCATTTTGGGAAATAAGACTAGTGGGCCTATTCTCATCTACCCTATGAACAAGAACAAgtgggaccatcggagctcggtggtgacaccagacgaggaggtgttttacctggtggcatttctGAGATCAGCTTTGGATGCTGAGACACTGGAGTACCTGACTAATCAGAACCGTCAGATTCTGAGATTCTGCCATGATTCGAAGATCAAGATGCAATTCGACCCTCGCCGAATCTTAGCAACAGGCCAGCGAATATTCGATTTTCAGCCTTCCACTAAGGATGACATGTAA 1500 0.406 MEAVKINKKIINILLTIAVCRLILTVESTLTEILDVGLEGEVSVKESELEAVSLDFGRLSSRGEALAVVRPRSADDVAKVVRAAYEWPCFAVSARGHGHSINGQADTRVKGVVIEMGKGGVESSNNPPRVWEKEMYVDVWGGELWIHVLKATLEYGLAPKSWTDYLYLSVGGTLSNAGISGQTFNHGPQISNVFQLDVVTGKGEVLTCSEDRNSDLFHAVLGGLGQFGIITRARIALQPAPQRVRWIRVLYSNFSTFCKDQEFLISLHGKPATQRFDYVEGFVIVDEGLINNWRSSFFSPSNPVKISSLNADGGVLYCLEITKNYHQGNADSVDEEIQPLLKKLDFIPKSVFTTDLPYVDFLDRVHKAELKLRSKGLWDVPHPWLNLFIPKSRIEDFDKGVFKGILGNKTSGPILIYPMNKNKWDHRSSVVTPDEEVFYLVAFLRSALDAETLEYLTNQNRQILRFCHDSKIKMQFDPRRILATGQRIFDFQPSTKDDM 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03235 499 SUPERFAMILY FAD-binding/transporter-associated domain-like 40 239 IPR036318 GO:0050660
Car05g03235 499 Gene3D - 116 242 IPR016169 -
Car05g03235 499 SUPERFAMILY FAD-linked oxidases, C-terminal domain 241 490 IPR016164 GO:0003824|GO:0050660
Car05g03235 499 ProSiteProfiles PCMH-type FAD-binding domain profile. 61 240 IPR016166 GO:0071949
Car05g03235 499 PANTHER GULONOLACTONE OXIDASE 12 474 - -
Car05g03235 499 PANTHER CYTOKININ OXIDASE 5-RELATED 12 474 - -
Car05g03235 499 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 241 474 IPR015345 GO:0009690|GO:0019139|GO:0050660
Car05g03235 499 Gene3D - 244 474 IPR016170 -
Car05g03235 499 Gene3D - 53 115 IPR016167 -
Car05g03235 499 Pfam FAD binding domain 66 209 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03235 Car-Chr5 77100551 77106426 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03235 K00279 - gmx:100790584 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03235 05 77100551 77106426 Car05g03235 05 77100551 77106426 ECH