Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03214 ATGAAGGATAAGTTCTTTCTAATTCTAGTTTTCTATGCATTCTCATCACTATTCCACGTAGAAGCAGACAGTGAGTTTGTGAAAACAAGAGGAGTGCAACTTATGCTAAACGGAAGCCCCTATTATGCAAATGGTTTTAATGCATATTGGTTAATGTATGTTGCTTCTGATCCATCTCAAAGAAACAAGGTTTCATCAACGTTTCAAGAGGCTTCAAATCATGGACTTAACATAGCAAGAACTTGGGCTTTTAGTGATGGTGGTTATAAACCACTACAATACTCTCCTGGATCCTACAATGAGGACATGTTCCAGGGATTGGACTTTGTAATAGCTGAAGCAAGAAGATATGGGATCAAAGTGGTTTTGAGTTTAGTGAACAATTATGAGAATTTTGGAGGAAAGAAACAATATGTGGAATGGGCAAGGAGTCAGGGTCAGTCCATAAATTCTGAAGATGATTTCTTCACGAATCCTATAGTGAAGGGATACTATAAAAATCACATCAAGAGTGTGGTTACAAGACGTAACAGCCTAAGTGGAGTTGCTTACAAAGATGATCCTACAATAATGGCTTGGGAGCTTATGAATGAGATTAGATGCCCTTCAGATCACTCAGGAAATTCAGTTCAGGGTTGGATTAATGAGATGGCATCTTACTTGAAATCCATTGATGGAAACCACTTACTTGAAGCTGGTTTGGAGGGTTTCTACGGGCAATTAAAGGCAGAGTCTAACCCTAACTTTCAAGTAGGAACCGATTTCATTGCAAACAACCAAATTCCCACCATCGATTTTGCAACACTACACTCCTACCCAGATCAATGGTTATCAAATTCAGGCTATGAAGACCAAATATCTTTCTTAGGTAGCTGGCTCAATGAACACATCCAAGATGCACAGAACATCCTTCACAAGCCCCTTCTATTTGCTGAGTTTGGCATTTCCACTTACAACTCAACACTGAGAGATCAGTTTTTCAATACGGTATTTTCCGCGATATATTCATCAGCAAGTGGTGGTGGGGCTGCTGCCGGTGGCTTATTTTGGCAACTTCTTGCTAAATGGATGGATTCTTTCCGAGATGGTTACGAGGTGGTCTTAGGTGAGAGCCCCTCGACAGCTACTTTGATTGCTCAAGAGTCTCAAAAACTAAACCGAATTCGCAAGATGTATGCCCGGCTCAGAAACATTGACAAGTGGAACAAATCAAAGGGAAATTAG 1224 0.4036 MKDKFFLILVFYAFSSLFHVEADSEFVKTRGVQLMLNGSPYYANGFNAYWLMYVASDPSQRNKVSSTFQEASNHGLNIARTWAFSDGGYKPLQYSPGSYNEDMFQGLDFVIAEARRYGIKVVLSLVNNYENFGGKKQYVEWARSQGQSINSEDDFFTNPIVKGYYKNHIKSVVTRRNSLSGVAYKDDPTIMAWELMNEIRCPSDHSGNSVQGWINEMASYLKSIDGNHLLEAGLEGFYGQLKAESNPNFQVGTDFIANNQIPTIDFATLHSYPDQWLSNSGYEDQISFLGSWLNEHIQDAQNILHKPLLFAEFGISTYNSTLRDQFFNTVFSAIYSSASGGGAAAGGLFWQLLAKWMDSFRDGYEVVLGESPSTATLIAQESQKLNRIRKMYARLRNIDKWNKSKGN 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03214 407 Pfam Cellulase (glycosyl hydrolase family 5) 59 322 IPR001547 GO:0004553|GO:0071704
Car05g03214 407 SUPERFAMILY (Trans)glycosidases 26 377 IPR017853 -
Car05g03214 407 Coils Coil 378 398 - -
Car05g03214 407 Gene3D Glycosidases 22 389 - -
Car05g03214 407 PANTHER - 5 405 IPR045053 GO:0004553
Car05g03214 407 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 5 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03214 Car-Chr5 76893810 76898036 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03214 26 406 Glycoside Hydrolase AT5G66460 65.206 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03214 K19355 - gmx:100794126 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03214 05 76893810 76898036 Car05g03214 05 76893810 76898036 ECH