Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03207 atgggaacccttggaagagcgatttacagcgtcggattctggattcgagaaactggacaagccattgatcgccttggttcccgccttcagggtggttactacttccaagagcagcTGTCTAGGCATCGAACTCTGATGAACATATTTGACAAGGCTCCTGTTATTGATAAGGATGTATTTGTTGCACCAAGTGCTTCCATCGTTGGTGATGTGCAAGTTGGAAAGGGGTCATCAATTTGGTATGGATCCGTCTTGAGAGGTGATGTTAACAGCATCAGAGTTGGAAGTGGAACTAACATTCAGGATAACTCCCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTCTTGCCTACTATTATTGGGGATAATGTTACTGTAGGTCACAGTGCTGTTTTACATGGTTGTACTGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAATTCTACTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTTGCTGCTGGGGCCCTTGTGAGACAGAATACAAGGATTCCATCTGGCGAGGTTTGGGCAGGCAATCCAGCGAAGTTTCTGAGAAAGCTCACTGATGAAGAGATAGCTTTTATCTCTCAGTCAGCCACCAATTATAATAACCTTGCACAGGTCCATGCAGCAGAAAACTCAAAGCCGTTTGAAGAAATTGAGTTTGAGAAGGTGCTTCGTAAGAAATATGCACGTAAAGATGAGGAGTACGACTCTATGTTGGGTGTTGTTCGTGAGATCCCGCCAGAGCTTATTCTTCCAGACAATGTCTTACCTGATAAAGCAAAGAAAGCTCTTAACCAAAGCTCTTAA 828 0.3696 MGTLGRAIYSVGFWIRETGQAIDRLGSRLQGGYYFQEQLSRHRTLMNIFDKAPVIDKDVFVAPSASIVGDVQVGKGSSIWYGSVLRGDVNSIRVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAILLDGVVVEKNAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLTDEEIAFISQSATNYNNLAQVHAAENSKPFEEIEFEKVLRKKYARKDEEYDSMLGVVREIPPELILPDNVLPDKAKKALNQSS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03207 275 SUPERFAMILY Trimeric LpxA-like enzymes 47 213 IPR011004 -
Car05g03207 275 CDD LbH_gamma_CA_like 54 212 - -
Car05g03207 275 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 271 - -
Car05g03207 275 Gene3D Hexapeptide repeat proteins 43 222 - -
Car05g03207 275 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Car05g03207 275 PANTHER DYNACTIN SUBUNIT P25 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03207 Car-Chr5 76858418 76862787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03207 121 196 Miscellaneous Gene Families AT2G17640 32.941 7.06e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03207 K01726 - gmx:100777972 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03207 05 76858418 76862787 Car05g03207 05 76858418 76862787 ECH