Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03196 ATGATGCGAATTCCGAAGAAGCCATTCTCATTTTCTCTCTCTAACTTCTCTCCTCAACTCGTAGCACCTCTTTTATCTTCTCGCCTTTGCTTTGCCTTTGGAATTTCCGTTAGAACTTCTCGCCCCTTCGCCAACATCGCATCACCAGGAACTAACCAGTTGCATTCTCAATATTCAATGGACGAGAACCATGATGCTGGAATACATGACCCAAGATCAGTGGATATACCTGGCAATGATAGTGGAAAACAGCCACGTATATGGTCATCTTCTCCTGAACATGGATTTAAAACTGATATAGGCAAACAGATATTCTGTAACCGGTCACTGAATATGAAGAACATTGTTGCTGTTGGATTTGACATGGATTATACTCTGGCACAATACAAACCTGAAACTTTTGAATCCCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTACGATTTGGGATATCCTAGCGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAAAGAGGAAATATCTTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAGGGAGTTGTCAAAAGAAGATAAAGTTGGGACCTACGGAAATACTTTGGTACGCGATTCATTTGACGAGCCAGACTATGCTCTAATTGATACACTCTTTTCTCTTGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATTGTTATCCTGGAAAGATTCGAGAGGGCGTTGATTATGCTCGCATGTATAAAGATGTTCGAGCTGCAGTTGATTTGTGCCACCGTGATGGGACGTTGAAGCAAATGGTTGCTAAAGATCCTGGAAGGTATATCAATGAAGACAGCGCGATAGTGCCTATGCTTGAAATGCTCAGAGAATCTGGACGTGCAACATTTTTAGTGACAAATAGCTTATGGGACTATACAAACACTGTCATGAATTTCCTCTGTAGATCCAGAATGGTTGCTGGCAGTAACAATTTTAACTGGCTTCAATACTTTGATGTTGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCACGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACTGGAATGCTACTCAATACAGATAATGGCTCTCCTATGCCCCAGGTGGGTAACATCTCGGCAAGGTTATTCACAGAAGCAAAGAGTCATGCTTGTCAAGTTTTCCAGGGAGGCAATGTCGCTCATCTGCATAAACTGCTTTCCATTGAATCAAGTTCACAGGTTCTGTATGTGGGGGATCATATTTATGGAGACATACTGCGTAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAGTCCCAGAGCTTGAGAAGGAGGTTAAACTCCTCTGGGAATCAAGGGACACCCGAAAGGAGCTTCAGTTCTTGAGGAGTGAGCGTGATCGCATTGAGGATGAAGTACATTATTTGAAGTGGTCTCTCAAATTCAAGAACCCAGATGCTGATGCCAAACAGAAGTTATCTTCAGCACTTTATAAATTGGAGCTTGAAAGAGAGAGAATGCGATTAGTCCATCAAGAAGCTCAAAGAAAATTACATCAAAGGTTTCATGAACCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGCCAAGTATCTAACTTGGCCATGCACTCTCCAGACAAGTATTACAGACCCAGTGAAGATTTTATGCAGCATGAATTTGGCATTCTGACTTGTGAACCACGACAAATGTAA 1803 0.4176 MMRIPKKPFSFSLSNFSPQLVAPLLSSRLCFAFGISVRTSRPFANIASPGTNQLHSQYSMDENHDAGIHDPRSVDIPGNDSGKQPRIWSSSPEHGFKTDIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPSELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCYPGKIREGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPGRYINEDSAIVPMLEMLRESGRATFLVTNSLWDYTNTVMNFLCRSRMVAGSNNFNWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARLFTEAKSHACQVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKLLWESRDTRKELQFLRSERDRIEDEVHYLKWSLKFKNPDADAKQKLSSALYKLELERERMRLVHQEAQRKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLAMHSPDKYYRPSEDFMQHEFGILTCEPRQM 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03196 600 CDD HAD_cN-II 105 476 - -
Car05g03196 600 Gene3D - 264 481 IPR023214 -
Car05g03196 600 Gene3D - 100 150 IPR023214 -
Car05g03196 600 SUPERFAMILY HAD-like 102 591 IPR036412 -
Car05g03196 600 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 104 472 IPR008380 -
Car05g03196 600 MobiDBLite consensus disorder prediction 66 93 - -
Car05g03196 600 Coils Coil 465 485 - -
Car05g03196 600 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 42 593 IPR008380 -
Car05g03196 600 Coils Coil 510 530 - -
Car05g03196 600 Pfam 5' nucleotidase family 104 590 IPR008380 -
Car05g03196 600 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 42 593 - -
Car05g03196 600 PIRSF NT5C2 81 599 IPR016695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03196 Car-Chr5 76802482 76809882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03196 - - gmx:100793438 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03196 05 76802482 76809882 Car05g03196 05 76802482 76809882 ECH