Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03193 ATGGCGGCAGATGTAGGATGCTGTGGAACAAAATTCTGGCTGTACTTGATAGTCATCGTAGGATTGGTATGCTTCGCTGGTCTGATGGCCGGGCTCACTCTTGGGCTCATGTCTTTGGGCCTCGTCGACCTCGAAGTTCTCATCAAATCAGGTCGTCCTCAACATCGCATCCATGCTGCCAAAATTTTCCCTGTTGTTAAGAACCAGCATCTTTTGCTTTGCACTCTTTTAATTGGAAATTCCTTAGCCATGGAGACTCTTCCAATTTTTCTTGATGCTATTGTGCCCCCTTATGCTGCTGTTTTGATTTCAGTCACTCTCATCCTCATCTTTGGAGAGATATTGCCTCAAGCAATTTGTACTCGATATGGGTTAACGGTTGGAGCAACACTAGCCCCATTTGTTCGTGTTCTTCTTATAGTATTCTACCCTATCTCTTATCCAATCAGCAAGGTGCTTGATTGGATGTTGGGTAAAGGAAAGGCTGCTCTTTTAAAGAGGGCAGAGCTCAAGACTTTTGTGAATTTTCATGGGAATGAGGCCGGGAAAGGAGGAGATTTAACACATGATGAGACAACAATCATAACCGGTGCGCTTGAATTGACTGAAAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACCCTAAATTCAATAATGACAATGGGTCATAGTAGAGTCCCAGTTTATGCGGGAGAGCGGACAAACATTATGGGACTTGTTCTGGTTAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGATCATCAGAAAAATTCCTCGTGTTTCAGAGAATATGCCCCTCTATGATATACTTAATGAATTTCAGAAGGGTCACAGTCATATTGCAGTTGTATATAGGGATCTAAATGATAAAAAAGAAGCATCCAAGAAAATTAAAGATGAGGAACAGCTTGAGTTTAAGGACAGCTGTAAGAACAAAGGAAAAAGCTCTCCCTTGGATAAAGGTGCAAAGTTGGAGCCACGCAATACTTTGACTGCTGGTGGTAAGATTGATGGCGGCCCACAGGTGAAAAAAGGTCCACCAGCAATGCCTGCTTTTAAAAAGAGACACAGAGGTTGTTCATATTGCATCCTGGACATTGATAATGCTCCCCTGCCTGTGTTTCCACCCAACGAAGTGGTTGTTGGTGTTATTTCGATGGAGGATGTAATCGAAGAGCTTCTTCAGGAGGAAATACTTGATGAAACCGATGAATATGTTAACATCCATAACAAGATAAAAGTTAACATGAATGCTTCTAAGGAGAAGGCTTCTGGTGCAAATTTGTTGCAGCCTTCTAATTTAGCAGTTCAAGGACACACGCCAAGTAATTCGATTTCTACAGCTACTTCGGCAACGGGTTCACCAACCACCATTGATCAAATCTCTGAAAGTGAGTCACTCAAGAATCAATAA 1479 0.4192 MAADVGCCGTKFWLYLIVIVGLVCFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQHRIHAAKIFPVVKNQHLLLCTLLIGNSLAMETLPIFLDAIVPPYAAVLISVTLILIFGEILPQAICTRYGLTVGATLAPFVRVLLIVFYPISYPISKVLDWMLGKGKAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTMGHSRVPVYAGERTNIMGLVLVKNLFMVDSKAAVPLRKMIIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNDKKEASKKIKDEEQLEFKDSCKNKGKSSPLDKGAKLEPRNTLTAGGKIDGGPQVKKGPPAMPAFKKRHRGCSYCILDIDNAPLPVFPPNEVVVGVISMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASKEKASGANLLQPSNLAVQGHTPSNSISTATSATGSPTTIDQISESESLKNQ 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03193 492 MobiDBLite consensus disorder prediction 330 370 - -
Car05g03193 492 SUPERFAMILY CBS-domain pair 195 417 IPR046342 -
Car05g03193 492 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 478 - -
Car05g03193 492 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 478 IPR045095 GO:0010960
Car05g03193 492 MobiDBLite consensus disorder prediction 456 492 - -
Car05g03193 492 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Car05g03193 492 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Car05g03193 492 Pfam Cyclin M transmembrane N-terminal domain 17 189 IPR002550 -
Car05g03193 492 Gene3D - 189 324 IPR046342 -
Car05g03193 492 Coils Coil 306 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03193 Car-Chr5 76773017 76778004 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03193 K16302 - gmx:100804572 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03193 05 76773017 76778004 Car05g03193 05 76773017 76778004 ECH