Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03182 ATGCTTATTGAAGCAATGGAGAGTTCAGTGAATGGTGGATTCTCTCATTTGCAGAGTGGTGATAGTAGTGAAGAAGAGCTTTCTGTGCTGCCACGTCATACCAAAGTTGTTGTTACCGGAAATAACCGTACCAAATCGGTACTCGTTGGTCTTCAAGGTGTCGTTAAGAAAGCCGTTGGATTAGGTGGATGGCATTGGCTGGTTCTTACGAATGGTATTGAAGTGAAGCTACAGAGGAATGCTCTTAGTGTGATTGAAGCACCCACTGGTAACGAAGAAGACGATGACCTTGAATTTGATAATGTGCAATGGAATGGATCAGATTTGGCATCGGACGACACACACAAATCCCACAAATCGAGGCACAGAATGCATAGATCATTGGGATCATGTCACAAGACCATGAGTAGGTCCTTCTCTGGTGATTCACAGTCTAAGGGGTCCGTTTCTATGCCTCATGGGTCCACGAAGGTTGACTTGAGCAAACTTGAAATGGCTGCATTGTGGAGATATTGGCGACATTTTAATCTTGTGGATGTTGTCCCTAATCCATCAAAAGAGCAGCTAGTAGATGTTGTTCAGAGGCATTTCATGTCCCAGCAATTGGACGAGTTGCAGGTAATTGTGGGTTTTGTCAAAGCTGCAAAGAGGCTCAAGACGACTATGTGCAAATGA 675 0.443 MLIEAMESSVNGGFSHLQSGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFDNVQWNGSDLASDDTHKSHKSRHRMHRSLGSCHKTMSRSFSGDSQSKGSVSMPHGSTKVDLSKLEMAALWRYWRHFNLVDVVPNPSKEQLVDVVQRHFMSQQLDELQVIVGFVKAAKRLKTTMCK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03182 224 PANTHER SAP30 3 224 IPR024145 -
Car05g03182 224 MobiDBLite consensus disorder prediction 108 155 - -
Car05g03182 224 Gene3D - 138 224 IPR038291 -
Car05g03182 224 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
Car05g03182 224 MobiDBLite consensus disorder prediction 131 155 - -
Car05g03182 224 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 3 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03182 Car-Chr5 76702513 76706426 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03182 - - gmx:100809195 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03182 05 76702513 76706426 Car05g03182 05 76702513 76706426 ECH