Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03178 ATGGCACTTTCTACTAACTCAAAAATATCTCAACTCCTCTTCCTTTTACCGCTTCTACTAGGTAATGTAGCTTTGGGGACAGTGTTTACAATAGAAAACCATTGCAACAACACAATCTGGCCGGGAACACTTTCCGGCAATGGCGCTGCTCTCCTCGGCGACGGAGGATTTTCCCTGCCGCCGGGATCATCTGTTCAGCTCACCGCTGCGTCGGGATGGTCAGGACGATTCTGGGGTCGAACCGGCTGCAACTTCGACGGTGCCGGTAACGGGAATTGCATCACCGGAGACTGCGCCGGAGGAATGAATTGCAACGGGGGAGGTACCCCGCCGGTGACGTTGGCGGAGTTTACGATCGGAAGCGGAAACGAAGACAAAGATTTCTATGATGTGAGTTTGGTGGACGGTTACAATGTTGGGATGGGGATAAGGGCAACCGGAGGAACCGGTGATTGTCAGTATGCGGGGTGTGTTGCGGATTTGAATGGTAACTGTCCGGCGGAATTGCAGGTAACGGAGGAAGGGGGTTCGGTGGTGGCGTGTAAGAGTGCGTGTGCGGCGTTTAATACGGCGGAGTTTTGCTGCACCGGCGAACATTCGAGTCCGCAGAGTTGTAGTCCGACGAAGTATTCGGAGATGTTTAAGAGTGCGTGTCCTTCTGCGTACAGTTATGCTTACGATGACGCTTCAAGCACTTGCACATGTTCTGGTTCCGATTATCATATCACTTTTTGTCCAACTGCTTCATCCTAG 753 0.5219 MALSTNSKISQLLFLLPLLLGNVALGTVFTIENHCNNTIWPGTLSGNGAALLGDGGFSLPPGSSVQLTAASGWSGRFWGRTGCNFDGAGNGNCITGDCAGGMNCNGGGTPPVTLAEFTIGSGNEDKDFYDVSLVDGYNVGMGIRATGGTGDCQYAGCVADLNGNCPAELQVTEEGGSVVACKSACAAFNTAEFCCTGEHSSPQSCSPTKYSEMFKSACPSAYSYAYDDASSTCTCSGSDYHITFCPTASS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03178 250 Gene3D Thaumatin 27 246 IPR037176 -
Car05g03178 250 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Car05g03178 250 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Car05g03178 250 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Car05g03178 250 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Car05g03178 250 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Car05g03178 250 ProSiteProfiles Thaumatin family profile. 26 248 IPR001938 -
Car05g03178 250 PANTHER OS03G0233200 PROTEIN 24 246 IPR001938 -
Car05g03178 250 SMART tha2 29 246 IPR001938 -
Car05g03178 250 CDD TLP-PA 28 245 - -
Car05g03178 250 Pfam Thaumatin family 33 246 IPR001938 -
Car05g03178 250 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Car05g03178 250 PANTHER PATHOGENESIS-RELATED PROTEIN 5 24 246 - -
Car05g03178 250 SUPERFAMILY Osmotin, thaumatin-like protein 28 246 IPR037176 -
Car05g03178 250 PIRSF PR5 1 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03178 Car-Chr5 76670707 76671922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03178 9 246 Receptor kinase-like Gene Family AT5G38280 43.265 4.31e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03178 - - gmx:100809378 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03178 05 76670707 76671922 Car05g03178 05 76670707 76671922 ECH