Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03168 ATGGCAGCTGTCTCCGATCAACCCACAAGTATATGCATTCACTGTGATCGGCCTATTCCCGCTGCAAATATTGATTTGCATTCTGTTCATTGCGCCCGGAACCTTGAAAAGTGTAAGGTTTGCGGTGATATGGTACCCAAGCAACATGCTGAGGATCACTATTTGAGCACCCATGCACCGGTTTCCTGTTCACTGTGCAGCGAAACAATGGCCCGTGATAGTTTAGATATCCATAAAGGTGAAAATTGCCCCCAAAGGATTGTCACCTGTGAGTTTTGTGAGTTTCCATTGCCAGCAATTGATCTGGCAGAGCATCAGGAAGTATGTGGAAATCGAACAGAGCTTTGTCAACTTTGTAACAAATATGTTAGACTGCGTGAAAGATACAACCATGAATTTAATTGCAACATAATCCAAGACAATGCTGCAGGGTCTTCAAGGAACGAGAGACCAGCTGAAAGAGATGCAAGTGCACCAAGAAGGCAGCAGAACGAATTCTCAAAAGGACGTCTTCTTTTCACAATTGCAATAACCGGCATCGCTGTTATACTTGGATCTATTTTTTACCAGAGAAAGGCAGAACCCAGTAATGTGCATTAG 600 0.4367 MAAVSDQPTSICIHCDRPIPAANIDLHSVHCARNLEKCKVCGDMVPKQHAEDHYLSTHAPVSCSLCSETMARDSLDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCQLCNKYVRLRERYNHEFNCNIIQDNAAGSSRNERPAERDASAPRRQQNEFSKGRLLFTIAITGIAVILGSIFYQRKAEPSNVH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03168 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 199 - -
Car05g03168 199 MobiDBLite consensus disorder prediction 144 163 - -
Car05g03168 199 MobiDBLite consensus disorder prediction 147 161 - -
Car05g03168 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 111 IPR013083 -
Car05g03168 199 ProSiteProfiles Zinc finger TRAF-type profile. 49 93 IPR001293 GO:0008270
Car05g03168 199 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03168 Car-Chr5 76594934 76598843 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03168 - - ccaj:109808130 336.265