Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03161 ATGGGTTCGGTTATAGACGACGACGTTTCACCGATCGAAGAGGTTCGGGCTGTAGTATCAAACGACGATGACCCGAACCAACCGGTATGGACGTTTCGTATGTGGACACTGGGAATTATTTCGGTCGTGTTACTTTCGTACCTAAACACTTTCTTCGGGTACAGAGCCGAACCACTTACGGTTACGATGATTTCGATTCAAGTTGCGACACTTCCTATTGGTCGATTCATGGCTCGTGTGTTACCGACAACGAAGTTTCGTATCATTGGGTTTGGCGAGAGAGAGTTTTCCTTAAACCCTGGTCCTTTTAACGTTAAAGAGCACGTGCTTATTTCAATATTTGCAAATGCTGGTGCTGCATTTGGGAATGGTTCTGCTTATGCTCTTAGTATTGTTGATATTATTCGTGCTTTTTATCATAGGAAGATTACATTCTTAACCAGTTGGATCCTCGTCATGACTACCCAGGTATTGGGGTATGGATGGGCGGGGATAATGAGGAAGTATGTGGTGCAGCCGGCGGAGATGTGGTGGCCAGCCACTTTAATGCAAGTTTCTTTATTCAGGGCTTTGCATGAAAAGGATGAAAGTCGCATGTCAAAAACCCATCAAATTGGGTCAGGCCAAAGTGGGCTTGGGCTTGGTTCCTTTTCTCTTGATTGGACCACTATTGCTTCTTTCCTTGGCAACCCACTTGTGACACCCTTTTTTGCAACGGTTAATATCATTGTTGGATACATCATATTAATCTACATGCTCATTCCTATAGCTTATTGGAGATTAAATGTCTATAATGCAAAAAACTTCCCCATATATTCTTCTAAACTATTCACCGCTAATGGTACGAGATATGACGTGCCAGCCATTGTCAACGAAAAGTTTGAGATAGATATGCAAGCATATGAGAAACAAGGTCACATCAATATGAGTGTCTTCTTTGCTATTAGCTATGGTGTTGGCTTTGCTGCAATTATTTCTACCCTCACTCATGTTGCCATATTTAATGGGAGAGAAATATATCAACAACTTCTATCTTCTCGATCTGGAAAGGAAGACATTCACACAAGGTTGATGAAGAAATATAAGGACATACCCAATTGGTGGTTTCATGCAACACTTTTGGTTTCATTTCTACTTGCACTTATGCTCTGTATTTTCATGAAAGACGAAATACAAATGCCATGGTGGGCCCTTATCTTTGCATCTGGGCTTGCACTCACTTTTACTCTCCCAATTAGCATCATAACTGCCACCACTAATCAGAGTCCAGGTTTGAATATTATTACTGAGTACGTTATGGGTGTGATTTCACCTGGAAAACCAATAGCCAATGTTTGCTTCAAGACTTATGGGTATATGAGTATGTCTCAAGCTGTTTCCTTTCTATCTGATTTCAAGCTTGGACATTATATGAAGATCCCACCAAGGTCAATGTTCATAGTTCAGATTTTAGGGACTCTTATAGCTGGAACAGTGGATGTTAGTGTGGCATGGTGGTTGTTGGGTTCAATAAAGAACATATGCCACGAAGAGCTACTCCCACAAGGCAGTCCATGGACATGTCCAGGTGACAACGTCTTCTTCGATGCATCCGTAATATGGGGTTTGGTCGGCCCAAGAAGAATTTTTGGCCCACTTGGAAACTACGCACAACTTAATTGGTTCTTCCTTATTGGAGCATTGGGCCCAGTAATTGTATGGGGTCTTATAAAAGCCTTTCCAAATAAAAAATGGATAACACACATTCACATCCCTGTTTTACTTGGAGCAACTGCAGCTATGCCACCAGCTAGTACAGTGAATTTCAATTCATGGATTATTGTTGCGATTATTTTCAACTATTTTGTGTTTAAATATCGTAAGAAGTGGTGGGAGAGGTACAATTATGTTCTTGCTGCTGCTTTAGATGCTGGCTTGGCTTTTATGACTGTTCTTCTATATTTTACGGTTAATACTGAACAAATCAGCTTAGACTGGTGGGGAACATCTGAGCATTGTGATCTTGCTAGATGTCCAACTGCTAAAGGCATAGTTACTCCTGGTTGTCCTACTTTTTGA 2058 0.4121 MGSVIDDDVSPIEEVRAVVSNDDDPNQPVWTFRMWTLGIISVVLLSYLNTFFGYRAEPLTVTMISIQVATLPIGRFMARVLPTTKFRIIGFGEREFSLNPGPFNVKEHVLISIFANAGAAFGNGSAYALSIVDIIRAFYHRKITFLTSWILVMTTQVLGYGWAGIMRKYVVQPAEMWWPATLMQVSLFRALHEKDESRMSKTHQIGSGQSGLGLGSFSLDWTTIASFLGNPLVTPFFATVNIIVGYIILIYMLIPIAYWRLNVYNAKNFPIYSSKLFTANGTRYDVPAIVNEKFEIDMQAYEKQGHINMSVFFAISYGVGFAAIISTLTHVAIFNGREIYQQLLSSRSGKEDIHTRLMKKYKDIPNWWFHATLLVSFLLALMLCIFMKDEIQMPWWALIFASGLALTFTLPISIITATTNQSPGLNIITEYVMGVISPGKPIANVCFKTYGYMSMSQAVSFLSDFKLGHYMKIPPRSMFIVQILGTLIAGTVDVSVAWWLLGSIKNICHEELLPQGSPWTCPGDNVFFDASVIWGLVGPRRIFGPLGNYAQLNWFFLIGALGPVIVWGLIKAFPNKKWITHIHIPVLLGATAAMPPASTVNFNSWIIVAIIFNYFVFKYRKKWWERYNYVLAAALDAGLAFMTVLLYFTVNTEQISLDWWGTSEHCDLARCPTAKGIVTPGCPTF 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03161 685 PANTHER ISP4 LIKE PROTEIN 202 684 IPR004648 GO:0055085
Car05g03161 685 PANTHER ISP4 LIKE PROTEIN 5 202 IPR004648 GO:0055085
Car05g03161 685 PANTHER OLIGOPEPTIDE TRANSPORTER 2 202 684 - -
Car05g03161 685 PANTHER OLIGOPEPTIDE TRANSPORTER 2 5 202 - -
Car05g03161 685 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 207 650 IPR004813 GO:0035673
Car05g03161 685 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 13 200 IPR004813 GO:0035673
Car05g03161 685 Pfam OPT oligopeptide transporter protein 206 649 IPR004813 GO:0035673
Car05g03161 685 Pfam OPT oligopeptide transporter protein 30 201 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03161 Car-Chr5 76531172 76536783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03161 6 685 Organic Solute Cotransporters AT1G09930 66.620 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03161 - - gmx:100785973 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03161 05 76531172 76536783 Car05g03161 05 76531172 76536783 ECH