Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03156 ATGGGTACCGGTTGGAGAAGAGCCTTTTGCACACGAGACCCTGAATCTACCATATCAGATAAAAACAACAACGGAAGCCCAAGCCCAAGCCCAAGAAGCTGTGCTCGTTTGAGTTTTCTTTCTGGAACTAGCAATCCTTCCACTCCACGTTTGCCTCAATCTCAACCAGTTTCAAGTCCAAGTCTTCGTTGCCGTACCATAACTGAAGCAGCTTCTCAAACAAATGATAGCCCAAGATTTCAATCCAAAAATAACACCCCAAGAGCTAACTCCACATCAAATCCAACTTCTCCTCGCTCTCCTCTCAAATTATCCCTCTTCAAAAACAGCTTCAAATTCAGGAGTAGCTGTGGAATCTGTTTGAATAGTGTGAAAACGGGACAGGGGAAAGCAATATACACAGCGGAATGTGCACATGCGTTTCATTTCCCGTGCATCGCAGCACATGTACGCAACCATGGAACTCTAGTTTGTCCTGTCTGCAACGCCACATGGAAAGACGTACCATTACTAGCGGCGCACAAGAATCTCGCTTCGGAATCCGAGAGGACCAACGAAATTCCCAATGCAATCGAGAAAACACCCATGGAAAATCACTCTTCCGTTTTCAGAACCAAGAATTTGGATCAGGTTCAACAACAAAATCAATTGAAGCATTCTGAATCAGCGAGATCTTATGATGATGATGAACCTCTCATTTCTCCGTCCGCCGGTGGTGGAAGAATCATCACTATTCCTGAAGCCGATGAAAACGAAGAGGAAGAAGACGATGATAACGTCGAGTTTCAAGGTTTTTTCGTCAACACGAAATCTAATTCCTCCTCAAATAAATCTTACTCTGACGATTTACAAATCGGCGACGGAGATTCAAGAACTGTTCAGATGAAGTTAATGCCGGAATGTGCCGTCGTATCAGTTTCACGTACTCATGAGACTTACGCTTTGGTTTTAAAAGTAAAGGCACCGCCGCCGCTTCGCGGCGGAAGTAGCACTGTGGACGCTTCACGGCGAGCGCCGATAGATCTTGTTACAGTGCTTGACGTTGGTGGAAGCATGACAAGCGCGAAGCTTCATATGCTGAAGCGCGCGATGCGTTTGGTTATTTCATCTCTTGGACCTGCTGATAGGCTTTCTATTGTGGCTTTTTCTGCTATTTCCAAACGTCTCTTACCTTTGAAAAGAATGACGGCTCAAGGCCAGCGTTTGGCTCGGCGCATCGTTGACCGGCTTGTAACCGGTGAAGGAAACAGTGTAGGTGAAGCTTTGAGAAAAGCTACAAGAGTATTAGAGGATCGTAGAGAAAGAAACCCGGTAGCTAGCGTTATGCTTCTATCCGACGGCCAAGATGAAAAGGTTCACAACCGTAATAAAACAAATCAACGGAAGACGTGGAGCCACGCGTCTTCAACCCGTTTCGCGCACATTGAAATTCCGGTTCACGCGTTTGGGTTTGGAAGCAAGAGCTGTTACAGTCACGAACCGGGTGAGGACGCTTTTGCAAAGTGCGTTGGTGGGCTTTTGAGTGTGGTAGTTCAAGATTTAAGGATTCAGCTGGGCTTTCAGTCTTATTCGGGCCGTGCTGAGATAAACGCAATTTACTCGTGTAGTGGGAGGCCCATGTTGTTGAGCCCAGGAGCAGTACGGCTCGGCGATTTGTACGCTGAAGAAGAGAGGGAGCTATTGGTTGAGCTGAGTATTCCCGCGTCAGCTTTGGGGGGTGGGACCCACCATGTGATGACGGTACGGTGTCTGTATAAGGACCCCGCAAGTCAAGAGATTGTATACGGTAAGGAACAGGGACTTACGGTGCCGCTACCTCAGTCTCTGACCGTACGATCATCAGGAACAAGGATCGAGAGGCTGAGGAATCTGTTCATAACCACTCGAGCCATAGCTGAGGCTAGGAGGCTTCTGGATCACAATAATGACTTCACCAGCGCTCATCATTTACTTGCATCGGCTCGTGGGCTTCTGATTCAATCTGGCTCAGCTTCAGCTGAGCAATATGTGCGCGGCTTGGAAGCTGAGCTTGCAGAGCTTCATTGGAGGAGACAGAGAGAACAGGTTCAAGTTGAGTTTCAGCAGCAACAAATAATGCAACAACGGAGAAGAGGGGGTGAGAGGGAGATGAATATGGTGGATGAAAATGGTGAGCCGCTTACACCTACATCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGATGGCAATGGTGAAGAAGTCTTTGAATAAAGTCAGCGACTTGCACGGCTTCGAAAACGCTAGGTTTTAA 2271 0.4764 MGTGWRRAFCTRDPESTISDKNNNGSPSPSPRSCARLSFLSGTSNPSTPRLPQSQPVSSPSLRCRTITEAASQTNDSPRFQSKNNTPRANSTSNPTSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGKAIYTAECAHAFHFPCIAAHVRNHGTLVCPVCNATWKDVPLLAAHKNLASESERTNEIPNAIEKTPMENHSSVFRTKNLDQVQQQNQLKHSESARSYDDDEPLISPSAGGGRIITIPEADENEEEEDDDNVEFQGFFVNTKSNSSSNKSYSDDLQIGDGDSRTVQMKLMPECAVVSVSRTHETYALVLKVKAPPPLRGGSSTVDASRRAPIDLVTVLDVGGSMTSAKLHMLKRAMRLVISSLGPADRLSIVAFSAISKRLLPLKRMTAQGQRLARRIVDRLVTGEGNSVGEALRKATRVLEDRRERNPVASVMLLSDGQDEKVHNRNKTNQRKTWSHASSTRFAHIEIPVHAFGFGSKSCYSHEPGEDAFAKCVGGLLSVVVQDLRIQLGFQSYSGRAEINAIYSCSGRPMLLSPGAVRLGDLYAEEERELLVELSIPASALGGGTHHVMTVRCLYKDPASQEIVYGKEQGLTVPLPQSLTVRSSGTRIERLRNLFITTRAIAEARRLLDHNNDFTSAHHLLASARGLLIQSGSASAEQYVRGLEAELAELHWRRQREQVQVEFQQQQIMQQRRRGGEREMNMVDENGEPLTPTSAWRAAEKLAKMAMVKKSLNKVSDLHGFENARF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03156 756 CDD vWA_C3HC4_type 340 511 - -
Car05g03156 756 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 756 - -
Car05g03156 756 ProSiteProfiles VWFA domain profile. 341 486 IPR002035 -
Car05g03156 756 SMART VWA_4 339 524 IPR002035 -
Car05g03156 756 SUPERFAMILY RING/U-box 110 167 - -
Car05g03156 756 MobiDBLite consensus disorder prediction 1 101 - -
Car05g03156 756 CDD RING-H2 117 162 - -
Car05g03156 756 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 227 IPR013083 -
Car05g03156 756 Coils Coil 684 704 - -
Car05g03156 756 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 756 - -
Car05g03156 756 Pfam RING-like zinc finger 117 146 IPR001841 -
Car05g03156 756 SMART ring_2 117 161 IPR001841 -
Car05g03156 756 MobiDBLite consensus disorder prediction 213 242 - -
Car05g03156 756 Pfam von Willebrand factor type A domain 342 448 IPR002035 -
Car05g03156 756 ProSiteProfiles Zinc finger RING-type profile. 117 162 IPR001841 -
Car05g03156 756 MobiDBLite consensus disorder prediction 15 101 - -
Car05g03156 756 SUPERFAMILY vWA-like 339 513 IPR036465 -
Car05g03156 756 Gene3D von Willebrand factor, type A domain 341 504 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03156 Car-Chr5 76439581 76443298 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03156 - - lja:Lj3g3v3131860.1 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03156 05 76439581 76443298 Car05g03156 05 76439581 76443298 ECH