Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03155 ATGGCCGTTTCAACCACTTTCTCCGCTGCCAAATTGGAGTCTATTTTCCTCAAATCTTCCTCTTCAAGGGCATTATCGTCCACTAACAACCATGTATCACTTCTCCCAAAACCCAGAACCACCTTCATTCAAAAAGGGATTATTCGATGTGATGCTCAAAATTCTGATGCTCAAAGTAATGCTACCACCCTCTCTGCTCTTGAACAGCTCAAAACTTCTGCAGCTGATAGGTATACAAAGGAAAGGAGCAGCATTGTCGTCATTGGGCTCAGTGTGCACACGGCTCCAGTGGAAATGCGTGAAAAACTTGCCATTCCAGAAGCTGAGTGGCCTAGAGCTATTGCAGAGCTGTGCAGTCTCAATCATATTGAAGAAGCAGCTGTTCTGAGTACCTGCAACCGAATGGAGATATATGTCGTCGCCCTATCCCAACACCGTGGTGTGAAAGAGGTCATGGAATGGATGTCAAAAACAAGTTCCATTCCTGTTTCAGAGCTTTGTGAGCATCGGTTCTTACTTTACAACAAAGATGCCACACAGCATCTTTTTCAAGTATCAGCAGGTCTTGAGTCTCTAGTATTGGGGGAGGGTCAAATCCTTGCTCAGGTTAAGCAAGTTGTCAAAGTTGGACAAGGAGTTAATGGCTTTGGAAGAAACATTAGTGGACTATTCAAGCATGCAATAACTGTCGGAAAAAGGGTTAGAGCGGAGACTAATATTGCTGCTGGGGCAGTTTCTGTGAGTTCAGCCGCTGTTGAATTGGCCTATATGAAACTACCTCGTGCCTCACACGATAATGCCAGGATGCTGGTTATCGGTGCTGGGAAGATGGGAAAGCTAGTAATCAAACATTTGGTTGCGAAAGGTTGCACAAGGATGGTTGTTGTCAATAGAACTGAGGAGAGAGTTGCTGCAATACGCGATGAACTGAGGGATATTGAAATAATTTACAAACCTCTTTCAGAAATGCACTCCTGTGCCAGTGAAGCAGATGTAGTTTTCACCAGTACAGCATCAGAAACCCCATTATTCATGAAAGAGAATGTCAAAGACCTTCCTCCTGCAAGTCAAGATGTCGGAGGCCGTCGTCTTTTCATTGACATTTCTGTTCCTCGAAACGTTGGTTCATGTGTCTCAGATATTGAATCTGCACGAGTTTACAATGTTGATGATCTTAAAGAGGTTGTGGCTGCCAACAAAGAGGATCGGCTAAGAAAAGCAATGGAAGCGCAAGCAATCATTGGTGAAGAGTTAAAACAATTTGAAGCTTGGAGGGACTCGCTGGAAACTGTTCCTACCATTAAAAAATTGAGAGCCTATGCTGAAAGGATCAGGGCTGCTGAGCTTGAGAAATGCTTAGGTAAGATGGGCGATGGTATCCCAAAGAAGACACGGAAAGCTGTGGATGATCTTAGTCGGGGTATTGTGAATAGGTTACTTCACGGTCCAATGCAACATTTAAGGTGTGACGGGAGTGACAGCCGAACTCTAACCGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAGCCTTGAGACCGAAATAGCTGTCTTGGAGCAAAAGATTCGAGCGAAGGTCGAACAAAACCAGAAGTGA 1602 0.4444 MAVSTTFSAAKLESIFLKSSSSRALSSTNNHVSLLPKPRTTFIQKGIIRCDAQNSDAQSNATTLSALEQLKTSAADRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVMEWMSKTSSIPVSELCEHRFLLYNKDATQHLFQVSAGLESLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRAETNIAAGAVSVSSAAVELAYMKLPRASHDNARMLVIGAGKMGKLVIKHLVAKGCTRMVVVNRTEERVAAIRDELRDIEIIYKPLSEMHSCASEADVVFTSTASETPLFMKENVKDLPPASQDVGGRRLFIDISVPRNVGSCVSDIESARVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEELKQFEAWRDSLETVPTIKKLRAYAERIRAAELEKCLGKMGDGIPKKTRKAVDDLSRGIVNRLLHGPMQHLRCDGSDSRTLTETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03155 533 Gene3D - 244 396 - -
Car05g03155 533 Hamap Glutamyl-tRNA reductase [hemA]. 84 511 IPR000343 GO:0008883|GO:0033014|GO:0050661
Car05g03155 533 CDD NAD_bind_Glutamyl_tRNA_reduct 85 407 - -
Car05g03155 533 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 533 - -
Car05g03155 533 ProSitePatterns Glutamyl-tRNA reductase signature. 181 204 IPR018214 GO:0008883
Car05g03155 533 PANTHER GLUTAMYL-TRNA REDUCTASE 1 533 - -
Car05g03155 533 Pfam Shikimate / quinate 5-dehydrogenase 254 395 IPR006151 -
Car05g03155 533 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 409 513 IPR015896 GO:0008883|GO:0033014|GO:0050661
Car05g03155 533 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 84 240 IPR036343 GO:0008883|GO:0033014|GO:0050661
Car05g03155 533 TIGRFAM hemA: glutamyl-tRNA reductase 85 493 IPR000343 GO:0008883|GO:0033014|GO:0050661
Car05g03155 533 Coils Coil 510 530 - -
Car05g03155 533 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 407 494 IPR036453 GO:0008883|GO:0033014|GO:0050661
Car05g03155 533 Gene3D - 83 243 IPR036343 GO:0008883|GO:0033014|GO:0050661
Car05g03155 533 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 88 238 IPR015895 GO:0008883|GO:0033014|GO:0050661
Car05g03155 533 Coils Coil 296 316 - -
Car05g03155 533 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 243 403 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03155 Car-Chr5 76428681 76431776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03155 K02492 - gmx:100782247 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03155 05 76428681 76431776 Car05g03155 05 76428681 76431776 ECH