Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03153 ATGGCCGCACCACCTCCCACCAAGGACCAAGTTCTCTCTCTCCTCGCCGCTGCCAACAACCACGGCGACATCTCCGTCAAAACCACTTCCTTAAAACAAGCCAAACACCTTCTTCTATCTCTCCACCCTTCTCTCGCCGCTGACCTCTATCCTTATCTCCTTGAACTTCAGTCTTCTCCCGAATCCCTCGTTCGCAAATTGCTCATACAGATAATTGAGGATATTGGTTTTAGAGCAGTTGAACATTCTCCTTCACTGATATCTTCATTATTAACATTTCTACGAGACAGTGATGTAACGGTCGTAAAACAGTCTATTATTAGTGGTACTAATATCTTCTGTAGTTGTTTTGAGGAGATGATTATGCAGTTTCAACAGTGTGGTAAAGTTGAGAGGTGGTTAGAAGATATTTGGATGGGAATGCTCAAGTTCAAGGAGGCTGTTTTTGAGATTGCTATGGAGGGTGGCTCTAGTGGAATAAAGTTGCTGGCACTGAAATTCTTGGAAGTTTTTGTATTACTTTTTACATCCGACATCCATGATCCTGAGAAATCCTCCAATGAAGGAGTCAGTCAAGCTGTTAATATCTCATGGTTGGTGGGTTGTCACCCAGTTCTTGATCCAATGGTGCTTACGACAGAGGCCAATAGGACTATTAGCATTTTATTAAAATTATTGCAGTCTGCTGGCAGTCTCCCTGGTTGCTTGACAATTACTGTTGTAAATTGTTTAGCATCTATTGCAAGGAAAAGGTCACAACACTATGATACTATCCTTTCAGCATTGCTTGATTTTGATCCAAATTTTCAAACAGTGAAAGGATGTCATGTTGCCAGTATTCAGTACTCTTTAAGAACAGCCTTTTTGGGTTTTCTAAGATGCACTTATTCTCCAATACTAGAGTCAAGAGAAAGACTGATAAGGAGTCTGCGAGCTATGAATGCGGGGGATGCTGCTGATCAGGTAATTCGGCAAGTAGACAAAATGATTAAAAATGGTGACCGTTTTACCCGCGATGCTCGAGATGACCAACCATCTACTCAGTCACCCATTTCAGGGGAATTAACTAGGAAAAGACCTGTTTCTCATGATAGTGAACAATTGGCCAATGGTCATGAGTCCATCGCTAAGCGGATTCGTTCTGGTCCTGACTCTGACTTTACTTTACCTGCTCAAATAAATGATTCTGGGAGGGATCTTAGCTCTGTTAACGGGGTGTCACCTAATGTTCCTGTTCTAGACCGTGAGCTAACTGCTGTGGAGCAAATGATTGCCGTGATTGGTGCTTTGATTGCTGAAGGAGAAAGAGCTAATATGAAACACTTGCCTAAGGCACCCCCACCACTAGCAAGGCTTGGTAATCCATCAGTAAATCAACAAATAGGTTCCCAAGATCCCCGTCGTCTGGATCCGCGGCGTGGAGCAATAATTCCTGGAGGAGCAGCTGTCTCAATTACAGATGATACTGGAGCCGCAAAATTAGAATATGAGGATCCTGTATCTTCTATTAAGCCTGCTTCATATCCTGTTCCAAGCACTGATGGCGATACCCAATCAGATATAACAATCAAAATAAAAACTGATGATATGATTTCTGATGGCTCCCTAGTTTCAGGACCTGATCAGGTTACTCCTAAAACAGAGGCTCTTGAAAGGCCTGGAGATCACCGGATTTCGGAAGCAAATGCTTCTTTAGATCTCGGGGTCTCATCCACTGATTCAAGAGATGAGGATCTCAGTACAGTAAATATTTCAGATGACGCTGAAATAAATGGGACTGATCCATCATCTCTATTAGAGCTTGATCAGTTTTCTATCGACGTCCAAGTACCATCCACATCAGAAGATACCTGTCTTGAGTTGCCACAGCTTCCACCATATGTTCAACTATCCCAAGAACAGGAAAGTAAGGTGAAACACATGGCTATTAGCCATATACTAGAGTCGTACAAACAATTGCATGGGGCAGATTGTCAGCAGTTTTGCATGCCACTACTTGCTAGACTTGTAGCTCAGATTGATGATGATAATGGGATCACTGTGATGCTGCAAAAACACATTCTGGAAGACCACTGGCGAAAGGGGCATGAATTTGTTCTgcatgttctgtaccatcttcactccttgacgatatcagattcagtcagaaACTCTTCATCTTCTGCTGTTTTATATGATAACTTTCTCTTGGGAGTGGCCAAAACTCTGTTGGATTCTTTTCCAGCTTCCGACAAGTCTTTTAGCAGACTTCTTGGTGAAGTTCCATTTCTTCCTGAATCAGCCTTGAAGATTTTGAATGATCTATGCTATTCTGATGTTATTGACCATGATGGAAAAGTTATCCGTGACATTGAGCGTGTAACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGACGTCCACAAAATCGGCAAGACTGCTTAGGAATAGTTTTGAAGTGTGCTGTCCACTCACAAGATGAGATCAGAGCTAAAGCTATTCGACTGGTGACAAACAAGCTCTTTCAACTTAGTTACATAGCAGAAGATGTTGTGAAATTTGCAACAAAAATGCTTCTCTCTGCGGTAGATCATGAAGTTTCAGATGCAGTGCAATCTGGACCTACTGAACAAAGAGCAGAGGTCAAAAGTCTTGAAATAAGTGGCACTTCTCAGGTTTTGGAGTCTACAATTTCTGAAAATGACACTGCTAGAGTTGCTAAACCAACTATCCAGAGTGTTTCATCTATATCGTTTTCTGAAGCGCAACGCCTCATTTCTTTATTTTTTGCCTTATGTACAAAGAAACCCAGTCTTCTACAGGTTGTATTTGATGTCTATGGGCAAGCCTCAAGAACTGTCAAGCAGGCTTTTCATCGCCACATTCCTAATCTTGTGAGGGCCCTAGGGCAATCTTATTCTGAATTGCTCAGTATCATATCTGATCCACCAAAAGGAAGTGAAAATCTTCTGACACTGGTAGTGCTGCAAATATTGACTCAAGACACAACACCATCTTCTGATTTGATATCTACCGTTAAACATTTATATGAAACTAAATTTAGAGATGTTACAATTCTTGTTCCATTATTGTCATCACTCTCCAAGACTGAGGTTTTACCAATTTTCCCACGACTTGTTGACCTTCCATTGGAAAAATTTCAAAGGGCACTTGCTCACATATTACAGGGTTCAGCTCATACAGGTCCAGCTTTGACACCTGTAGAAGTGTTGGTTGCAATCCATGGAATTGTTCCAGAGAAAGATGGTCTTGCACTTAAGAAGGCATGTCTTCTTCTATCTTTTTATATAACAGATGCTTGCTCGGCTTGTTTTGAACAACGTACAGTGTTCACTCAGCAGGTTCTGGCCAAGGCCTTGAACCAGATGGTTGATCAAACTCCGTTGCCTCTGCTTTTCATGAGAACAGTTATTCAGGCAGTTGATGCTTTTCCAGCACTGGTTGATTTTGTTATGGAGATACTCTCAAAACTTGTGACCAAACAGGTGTGGCGAATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACACAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCTCAACAACTGGAAAGTGCACTAAACAGGCATGCTAATCTCAGAGGGCCCCTAGCTTCTTATGCCAATCAACCAACTGTAAAATCTTCACTTACTAGATCAACTTTATCTGTTCTCGGTCTGGCAAATGAAACGCATGTGCAACAACATTTGCCAACGTCGTTGCACCATTCTGAAACAGGCACTTCAGTTGGTGGGGCAACTCTGACATGA 3792 0.4138 MAAPPPTKDQVLSLLAAANNHGDISVKTTSLKQAKHLLLSLHPSLAADLYPYLLELQSSPESLVRKLLIQIIEDIGFRAVEHSPSLISSLLTFLRDSDVTVVKQSIISGTNIFCSCFEEMIMQFQQCGKVERWLEDIWMGMLKFKEAVFEIAMEGGSSGIKLLALKFLEVFVLLFTSDIHDPEKSSNEGVSQAVNISWLVGCHPVLDPMVLTTEANRTISILLKLLQSAGSLPGCLTITVVNCLASIARKRSQHYDTILSALLDFDPNFQTVKGCHVASIQYSLRTAFLGFLRCTYSPILESRERLIRSLRAMNAGDAADQVIRQVDKMIKNGDRFTRDARDDQPSTQSPISGELTRKRPVSHDSEQLANGHESIAKRIRSGPDSDFTLPAQINDSGRDLSSVNGVSPNVPVLDRELTAVEQMIAVIGALIAEGERANMKHLPKAPPPLARLGNPSVNQQIGSQDPRRLDPRRGAIIPGGAAVSITDDTGAAKLEYEDPVSSIKPASYPVPSTDGDTQSDITIKIKTDDMISDGSLVSGPDQVTPKTEALERPGDHRISEANASLDLGVSSTDSRDEDLSTVNISDDAEINGTDPSSLLELDQFSIDVQVPSTSEDTCLELPQLPPYVQLSQEQESKVKHMAISHILESYKQLHGADCQQFCMPLLARLVAQIDDDNGITVMLQKHILEDHWRKGHEFVLHVLYHLHSLTISDSVRNSSSSAVLYDNFLLGVAKTLLDSFPASDKSFSRLLGEVPFLPESALKILNDLCYSDVIDHDGKVIRDIERVTQGLGAIWSLILGRPQNRQDCLGIVLKCAVHSQDEIRAKAIRLVTNKLFQLSYIAEDVVKFATKMLLSAVDHEVSDAVQSGPTEQRAEVKSLEISGTSQVLESTISENDTARVAKPTIQSVSSISFSEAQRLISLFFALCTKKPSLLQVVFDVYGQASRTVKQAFHRHIPNLVRALGQSYSELLSIISDPPKGSENLLTLVVLQILTQDTTPSSDLISTVKHLYETKFRDVTILVPLLSSLSKTEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKACLLLSFYITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHANLRGPLASYANQPTVKSSLTRSTLSVLGLANETHVQQHLPTSLHHSETGTSVGGATLT 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03153 1263 MobiDBLite consensus disorder prediction 554 577 - -
Car05g03153 1263 SUPERFAMILY ARM repeat 5 1011 IPR016024 -
Car05g03153 1263 Pfam Symplekin tight junction protein C terminal 1017 1203 IPR022075 -
Car05g03153 1263 Pfam Symplekin/PTA1 N-terminal 98 321 IPR032460 -
Car05g03153 1263 MobiDBLite consensus disorder prediction 387 402 - -
Car05g03153 1263 Gene3D - 4 344 IPR011989 -
Car05g03153 1263 MobiDBLite consensus disorder prediction 335 402 - -
Car05g03153 1263 MobiDBLite consensus disorder prediction 1244 1263 - -
Car05g03153 1263 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1239 - -
Car05g03153 1263 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1239 - -
Car05g03153 1263 MobiDBLite consensus disorder prediction 357 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03153 Car-Chr5 76396251 76416685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03153 K06100 - jre:108993132 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03153 05 76396251 76416685 Car05g03153 05 76396251 76416685 ECH