Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03152 ATGGCGTCAATTCGCCGGACACTATCTCCTGCGTATCACGAGCGTCACTACATAAACGGCGCCTTTTCAACGTCGTCTCCGTCTCACAAACTTCCTTCTTCAAACGGAAATTACTCTGCTCTAACAGCGTCGTTTCAGAGATTAATCGGTGGTGTTTTCACGCGCCGTTACAATCGAAAAGGACAATGGAGAAAAATAGCATACAGGTGCGTGCTTTGTTTCTTCGCTGGATTTTTACTAGGAATGTTTCCTTTTGGTAATCTTGTTCATGAAATTCCTCATCAAAAAATCAACAACAATATTGCTTTTGATGTAAACAAAACTCCACGCGCCGACGCTAAATTGATTATCGATGATCATGTTCCGGAGAAGCGCGTGGATGTCACTGTCGGTGATGATGATAAGGGTTTTGTAATTGATCCTGTGAGTTTGAGTTTGCGTGTGGACAATGCTGAGAAGGTGAAGGATTTGGTTGAACCTGAGAAGTTTGATTTTGTTGCCAGGAAGCAATTGATTGTGGTGACACCGACTTATAACCGCGCTTTTCAGTCGTATTTTTTGAATAGGTTAGGTCAGGTTTTGCGGTTGGTTCCGCCGCCGCTTCTTTGGGTGGTGGTGGAAATGAATTCTGCTTCTATGGAAACTGCTGAATTGTTGAGGAAAACGGGTGTGATGTATAGGCATTTGGTGTGTACTAAGAACTCAACTGATGTGAAAGACAGAGGAGTTCATCAGAGGAATAGAGCTTTGGAGCATATTGAATATCATAAACTTGATGGGATTGTTTACTTTGCTGATGATGATAATGTATACTCTCTTGAGTTGTTTCAGAAAATGAGAGATATCAGTCGTTTTGGCACTTGGCCTGTCGCCATGCTTGCACCAAGCAAGAACAAGGCTATTTTGGAGGGTCCAGTATGCAATGGAAGCCAAGTGATTGGGTGGCATACAAATGAGAAAAGTAAAAGACTTCGAAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCACAATCTTGTGGGATCCAAAGCGATGGCGACGCCCTACTACAAATTCTATTCGGCAATTAGACTCGGTGAAGGAGGGTTTTCAAGAGACCACCTTTATAGAACAATTGGTCGAAGATGAGAGACAAATGGACGGTTTGCCTCCTGGTTGTATGAAAATAATGAACTGGCATCTCCATTTGGATGTTCATAATGTAGTTTATCCAAAGGGTTGGATGCTTAAGAAAAACCTAGATGCTGTCGTACCCATCAAGTAA 1269 0.4224 MASIRRTLSPAYHERHYINGAFSTSSPSHKLPSSNGNYSALTASFQRLIGGVFTRRYNRKGQWRKIAYRCVLCFFAGFLLGMFPFGNLVHEIPHQKINNNIAFDVNKTPRADAKLIIDDHVPEKRVDVTVGDDDKGFVIDPVSLSLRVDNAEKVKDLVEPEKFDFVARKQLIVVTPTYNRAFQSYFLNRLGQVLRLVPPPLLWVVVEMNSASMETAELLRKTGVMYRHLVCTKNSTDVKDRGVHQRNRALEHIEYHKLDGIVYFADDDNVYSLELFQKMRDISRFGTWPVAMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTTNSIRQLDSVKEGFQETTFIEQLVEDERQMDGLPPGCMKIMNWHLHLDVHNVVYPKGWMLKKNLDAVVPIK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03152 422 Pfam Glycosyltransferase family 43 190 398 IPR005027 GO:0015018|GO:0016020
Car05g03152 422 PANTHER GLYCOSYLTRANSFERASES 125 419 - -
Car05g03152 422 PANTHER GLYCOSYLTRANSFERASES 1 89 - -
Car05g03152 422 CDD GlcAT-I 171 399 IPR005027 GO:0015018|GO:0016020
Car05g03152 422 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 170 416 IPR029044 -
Car05g03152 422 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 125 419 IPR005027 GO:0015018|GO:0016020
Car05g03152 422 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 89 IPR005027 GO:0015018|GO:0016020
Car05g03152 422 SUPERFAMILY Nucleotide-diphospho-sugar transferases 170 415 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03152 Car-Chr5 76390618 76394144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03152 1 422 Glycosyltransferase AT1G27600 57.944 2.80e-173 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03152 K20869 - gmx:100789348 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03152 05 76390618 76394144 Car05g03152 05 76390618 76394144 ECH