Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03151 ATGTGTATTCCCAAGCCATCATCAACATCTCCATTTTTGTGTCCCACAAAAACCAACCTCATAACTCCAAACCCAAAACTACTCATAAATAATCCTCATGATGATGAAGTTCAAGATCAAAATGAACTTCACAGATGGCCAACTCCAAATGAGGTGATAGAGGAAATGAAAGCCATAGCTAAAATATCATGTCCAACAGCAATAACAGGTTTAATCTTATATTCAAGAGCAATGATCTCAATGCTTTTCCTTGGTTATCTTGGCGAGACAGAACTAGCAGGTGGTTCTCTCTCCATAGGTTTTGCAAACATCACTGGTTACTCTGTCATCTCTGGTTTAGCCATGGGAATGGAACCCATTTGTGGACAAGCTTATGGAGCTAAACAATGGAAGATACTTGGTTTAACACTTCAAAAAACCATTCTTTTACTTCTTTCAACTTCAATCCCAATTTCATTAACATGGCTTAACATGAAAAAAATCCTCCTTTTTCTTGGTCAAGATGAAGAAATTTCATCAACAGCACAAACTTTCATTCTGTTTTCAATACCTGATCTTTTTTTTCTCTCTTTTCTTCACCCTCTTCGTATCTATTTAAGAACACAAGGTATAACATTACCATTAACATACTCTTCAGCAATCTCTGTGATTCTTCATGTTCCATTAAATTTTCTTCTTGTAATTCATTTCAAAATGGGTGTTGTGGGGGTGTCGATAGCAATGATTTTGACAAATCTCAACCTTTTGATTTTCCTTTCATCTTTTGTTTACTTTTCGGGTGTATATAAAGAATCATGGGTTTCGATTAGTTTAGAATGTTTCAAAGGTTGGTCATCGTTACTTTCACTTTCGATTCCGTCGTGTGTTTCTGTTTGTTTAGAATGGTGGTGGTATGAACTAATGATAATTTTGTGTGGACTTTTGGTCAACCCAAAAGCTACATTAGCTTCAATGGGTATTCTAATTCAAACAACTTCTTTGGTTTATGTTTTTCCTTCTTCACTTAGTCTTGGTGTTTCAACTAGAGTTGGAAATGAGTTAGGTGCAAATCGTCCTTCAAAAGCACGTTTTTCTATGATAGTATCACTTTTTTGTGCTTTTGGGTTGGGAATTTTGGCTATGTTGTTTACAACATTAATGAGAAATCAATGGGGCAGATTGTTTACTAATGATGTTGAAATTCTTAATCTAACGGCTATGGTTTTGCCAATTGTTGGGCTTTGTGAGATTGGGAATTGTCCACAAACAACAGGTTGTGGTGTTTTGAGGGGTAGTGCTAGACCAAGTGTCGGTGCGAATATCAATTTGGGTTCGTTTTATTTGGTGGGTATGCCGGTTGCTATTGTTCTTGGGTTTGTTTTTAAAATGGGTTTTTATGGGCTTTGGATTGGGTTGCTTGCGGCCCAAGTATCTTGTGCGGCACTTATGTTGTTTGTTCTATGTACAACGGATTGGAATGATCAAGTGGAAAGAGCAAAGAATCTTACAAAAACAActtcttcttcttctaattctacttTGTTACCAAGATTCGTCACAAAAACAATGTGTCATCACGACGACAACAATAATCACCATGGTTGTTTCGAAGAGATCATAGTATTCACAAATGATGATCATGATGGGCCTACCAAGACATGTACTATACCCTCACTTGAAACAGACCCACTTATCATACCCACTTAA 1686 0.3624 MCIPKPSSTSPFLCPTKTNLITPNPKLLINNPHDDEVQDQNELHRWPTPNEVIEEMKAIAKISCPTAITGLILYSRAMISMLFLGYLGETELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTLQKTILLLLSTSIPISLTWLNMKKILLFLGQDEEISSTAQTFILFSIPDLFFLSFLHPLRIYLRTQGITLPLTYSSAISVILHVPLNFLLVIHFKMGVVGVSIAMILTNLNLLIFLSSFVYFSGVYKESWVSISLECFKGWSSLLSLSIPSCVSVCLEWWWYELMIILCGLLVNPKATLASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANRPSKARFSMIVSLFCAFGLGILAMLFTTLMRNQWGRLFTNDVEILNLTAMVLPIVGLCEIGNCPQTTGCGVLRGSARPSVGANINLGSFYLVGMPVAIVLGFVFKMGFYGLWIGLLAAQVSCAALMLFVLCTTDWNDQVERAKNLTKTTSSSSNSTLLPRFVTKTMCHHDDNNNHHGCFEEIIVFTNDDHDGPTKTCTIPSLETDPLIIPT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03151 561 Pfam MatE 65 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car05g03151 561 Pfam MatE 286 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car05g03151 561 PANTHER PROTEIN DETOXIFICATION 33 509 - -
Car05g03151 561 TIGRFAM matE: MATE efflux family protein 73 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car05g03151 561 CDD MATE_eukaryotic 55 491 IPR045069 GO:0042910|GO:1990961
Car05g03151 561 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03151 Car-Chr5 76373701 76375976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03151 K03327 - gmx:100788339 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03151 05 76373701 76375976 Car05g03151 05 76373701 76375976 ECH