Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03142 ATGTGGGAGTATATAAGGCCCAAAACAGTCCCAAGAGGTCTGCTTAGGTCACACTGCAAGAGGGGGAAAATTCTCTCCCAATATTCATCGTTCCGTCGTTCTCTTCACTCCATCGTCGACACCGGTGCCGTTTCTTTTCCGTTCGATTCTTTAAGGTGTGATATTGTTTCGTGCGCATATTCATATTCAGTTCCAATGACTAAGAGACAGAAGAAAGGAGAACGAAATGGAAGAGGAAAACGGCATAAATCTTCACCGTTGGATTTATCTGCTGGAAGTGTTGTGTTCCGTTTGCTATGTCCTGTGACTAGAATTGGTAGTGTTATTGGTAAAGGTGGTTCTATTATATCACAAATTCGCGCTGAAACTGGTGTGAAGGTTAAGATTGAAGAACCTGTCCCTGGTTGCGACGAAAGAGTTATAGCCTTTTTAGGTTCTGATAATAAAGAGAGTGAAGAAGGTAGTGCTGAGCAGGCAAAGGAGGTTAATAATGATGAGAATGAAAGTAAGGTGAATGACGATGAGGGAAAAGATCGCGGTGGTGATGATAATGAAGATAAGGATTCTGTTCCCGTTGAAGATTCACAGAGTGAGAAGGGGAATTCAACTATTCTTAAGGCTGTTACCCTAGTTTTTGAGAGGATGGCTGAAGGAATAGAGGATATAGGTGAAGGTGACCATGAGAGTAATAAAGCTTCTTTCACTGTTTTAAGGCTACTTGTTCTTTCGAATCAAGTTGGGTGCATTTTGGGAAAAGGTGGCAGCGTAATAAAGAGGATGTCGTCTGATAGTGGGGCACAGATTCGGATCCTTCCTAAAGACGAAATTCCCATGTGTGCCTCGGTTTCTGACGAGTTAGTTCAGATCACAGGAGGAGTAGAAGTTGTCAGGAAAGCTCTTCAATCTGTTTTTCAGCAGCTTGTGGAAAATCCACCCCGTGAGCATGAATCTCTGCCTACCAATCTTACTGGGCCGTCATCTCATTCATTTGGTCAATTCCCATCAAATAAACGTAGCTTCGCTGGTCAAGGAGCGCCTTTTGCATCTGGGCCTAATGATATACCTGTTTTTCATTCTGCTCCTCCTATGATTCCCAAATTTCACGAAGGGGCCATGCATGGTCGCATGAGGCCCTCACTTGAAATTCTTACTTTTCGCTTATTGTGCCCTTCAGAAAAGGTCGGAAATTTAATTGGCAAAGGTGGAGCAATCATAAAGACTATGCAACAAGAGACGGCCAGTGAAATCAAGGTTATAGAAGCCATTCCGGGTTCAGAGGACTGCATTGTCATCATATCTGGTCCAGCGCACCCAGATGATAGAATATCTCCTGTGCAAGAGGCTGTATTTCGTGTGCAGAATAGAATATCCAGGGCTATACCTGATGCCAAAGAGCACAGTATGTTAGCAAGGGTTATTGTTTCTTCCAGTCAAATAGGTTGTCTCTTTGGGAAGGGTGGTTCCATCATAGCTGAAATGAGGAAGTTATCAGGAGCCCATATTCGTATGTTGGGTAAGGATAAGGGTCCTAAGTGTGTTTCAGAAGATGAAGAAGTAATTCAGGTAAGTGGCGAAATTGAGGCAGTGCATGATGCTCTTTTGCATATAACCACAAGATTAAGACATCATTTCTTTCGCGATGCATTTCCATCTGTCAATTTTCCTTCAAACTCTGCATTTCTGGATCAACATTCTCCATTCCCTCCTTATTTGGGAAGGCGGGGACATTCACCTCCCGGAATGTATTCTGACCTAGGTCCTCCACATCCACATCCACATGCTAGTTTTCCCCTTGATGATCACCCTCCTTTTATGAATAATATATATAGACAAGGCCTTCCTCCTCACATATCTGAAAGGAAGCCATGGGGCCCTAAGGGGATACATGAAGGGCACATGGGCTTGCCCGAATTTGCTGGAGGTCATCGCAGAATTTCTGGATTTGCAGGAGGGAGCCAACCGATTATCACAAGTACCACTGTTGAAGTTGTTGTTCCTCGAGCCCTGGTGCCTGTAATATATGGGGAAGATGGTGAATGCTTGAAACAAATACTCCAGATCTCTGATGCAAATGTTACTATTACTGATCCAAAACCTGGAGCTGTGGAAACTAAAATTATTATATCTGGAACCCCAGAGCAAACTAATGCTGCACAAAGTCTTATACAGGCATTTGTCATGAGTGAGAGGGAGTCTGGTTGA 2202 0.4355 MWEYIRPKTVPRGLLRSHCKRGKILSQYSSFRRSLHSIVDTGAVSFPFDSLRCDIVSCAYSYSVPMTKRQKKGERNGRGKRHKSSPLDLSAGSVVFRLLCPVTRIGSVIGKGGSIISQIRAETGVKVKIEEPVPGCDERVIAFLGSDNKESEEGSAEQAKEVNNDENESKVNDDEGKDRGGDDNEDKDSVPVEDSQSEKGNSTILKAVTLVFERMAEGIEDIGEGDHESNKASFTVLRLLVLSNQVGCILGKGGSVIKRMSSDSGAQIRILPKDEIPMCASVSDELVQITGGVEVVRKALQSVFQQLVENPPREHESLPTNLTGPSSHSFGQFPSNKRSFAGQGAPFASGPNDIPVFHSAPPMIPKFHEGAMHGRMRPSLEILTFRLLCPSEKVGNLIGKGGAIIKTMQQETASEIKVIEAIPGSEDCIVIISGPAHPDDRISPVQEAVFRVQNRISRAIPDAKEHSMLARVIVSSSQIGCLFGKGGSIIAEMRKLSGAHIRMLGKDKGPKCVSEDEEVIQVSGEIEAVHDALLHITTRLRHHFFRDAFPSVNFPSNSAFLDQHSPFPPYLGRRGHSPPGMYSDLGPPHPHPHASFPLDDHPPFMNNIYRQGLPPHISERKPWGPKGIHEGHMGLPEFAGGHRRISGFAGGSQPIITSTTVEVVVPRALVPVIYGEDGECLKQILQISDANVTITDPKPGAVETKIIISGTPEQTNAAQSLIQAFVMSERESG 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03142 733 MobiDBLite consensus disorder prediction 147 200 - -
Car05g03142 733 ProSiteProfiles Type-1 KH domain profile. 467 536 - -
Car05g03142 733 SMART kh_6 381 457 IPR004087 GO:0003676
Car05g03142 733 SMART kh_6 466 541 IPR004087 GO:0003676
Car05g03142 733 SMART kh_6 657 727 IPR004087 GO:0003676
Car05g03142 733 SMART kh_6 233 308 IPR004087 GO:0003676
Car05g03142 733 SMART kh_6 92 168 IPR004087 GO:0003676
Car05g03142 733 ProSiteProfiles Type-1 KH domain profile. 382 449 - -
Car05g03142 733 CDD PCBP_like_KH 384 453 - -
Car05g03142 733 MobiDBLite consensus disorder prediction 147 194 - -
Car05g03142 733 Gene3D K Homology domain, type 1 381 459 IPR036612 GO:0003723
Car05g03142 733 Gene3D K Homology domain, type 1 91 164 IPR036612 GO:0003723
Car05g03142 733 CDD PCBP_like_KH 471 537 - -
Car05g03142 733 ProSiteProfiles Type-1 KH domain profile. 658 722 - -
Car05g03142 733 ProSiteProfiles Type-1 KH domain profile. 234 303 - -
Car05g03142 733 CDD KH-I 660 723 - -
Car05g03142 733 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 68 597 - -
Car05g03142 733 CDD PCBP_like_KH 95 141 - -
Car05g03142 733 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 383 465 IPR036612 GO:0003723
Car05g03142 733 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 223 312 IPR036612 GO:0003723
Car05g03142 733 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 88 146 IPR036612 GO:0003723
Car05g03142 733 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 658 727 IPR036612 GO:0003723
Car05g03142 733 MobiDBLite consensus disorder prediction 316 335 - -
Car05g03142 733 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 464 546 IPR036612 GO:0003723
Car05g03142 733 MobiDBLite consensus disorder prediction 310 335 - -
Car05g03142 733 CDD PCBP_like_KH 236 304 - -
Car05g03142 733 Pfam KH domain 384 436 IPR004088 GO:0003723
Car05g03142 733 Pfam KH domain 471 536 IPR004088 GO:0003723
Car05g03142 733 Pfam KH domain 96 145 IPR004088 GO:0003723
Car05g03142 733 Pfam KH domain 237 301 IPR004088 GO:0003723
Car05g03142 733 Pfam KH domain 660 723 IPR004088 GO:0003723
Car05g03142 733 ProSiteProfiles Type-1 KH domain profile. 93 163 - -
Car05g03142 733 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 68 597 - -
Car05g03142 733 Gene3D K Homology domain, type 1 657 730 IPR036612 GO:0003723
Car05g03142 733 Gene3D K Homology domain, type 1 232 311 IPR036612 GO:0003723
Car05g03142 733 Gene3D K Homology domain, type 1 465 544 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03142 Car-Chr5 76269556 76274073 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03142 K21444 - gmx:100785136 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03142 05 76269556 76274073 Car05g03142 05 76269556 76274073 ECH