Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03124 ATGAGGGATGCAGGTGTGATCGAAAATCGAAGAAACTGGGAGTGGGAAATGGATGATATTATTGATGATGAGATTGAAATTGAGGAGGAATTTCCCGAAATAGAGGGATTCCAGATCCAACACATTCTCGACGACCTCGATTTCgaacaagaagaagaagaagaagaaTTATTCCATCACCCCTTTCTACACGAACATAATGCCATTCCCATTGACTCATCCAATGAATTCACTTTCAATACCAGTATCGCTTCTTTGCACACATATCTCGGTGATGTTGAAGACACGCGCCACAGGACCGCTTTCTTGGATGGTGGTGCTATTTTGAACCTTCCACTCTTTTCTCTTCAAGGAGTTGTACTCTTTCCTGGAGCTACTCTTCCCCTTAGGGTTACTGTTCCCCGTTTTGTGGTTGCTATTGAGAGAGCTATGAGTCAAGTTGATGTTCCTTACACCATTGGTGTGATTCGGGTTCACAGGGATAATGGAAGTTTTAGGAAGAAAATGGCAAGCATTGGGACAACTGCAGTGATTCGACAATATGGGCGTCTAGAGGATGGTTCACTGAATGTGGTTACCCGTGGACAACAACGATTTCACCTAAGGCGGTGTTGGAATGACGTGGAAAGAGGGCCTTATGGAGAGATCCAAATTATCGAGGAAGATCTACCATTGAGAACTCCGAGAGATGCTTTTGACAAATCAGCATCATCAAGTAATATGCTTAGCAGCCGTGTTAAAATGTGCGGCTTAAAAAATGGGGAAAATGATTCAGAAGCAAATTCAGATAAGGGTTTTGAGAGTGAGCTTTCACCAATAGAAAGGAAAATCCACCTACCAGCCATTGGCTCAGATCAGGCAATAAGATCCAATTTGGATTTGAGCAATGGGAACTGTTCCACTTCTGGAAAGCAGTCATCCAAAGAAGAGCTTAATAGATGCTATAAGAATATACTATCACATAAAATTTCAAAAGCATTCTGGCCCCACTGGGTATATCGTATGTATGACTCCTATACGCTTGCACAAAGGGCTGCAGATATGTGGAAGCAAATAGTTGGGGTGCCTAGTATGGATAGTCTCATCAAAAAGCCTGATGTTTTATCATTTCATATCGCCAGTAAAATACCTGTTTCTGAATCTACAAGGCAGGAGCTTTTGGATATAGATGGCATCGCATATAGGTTGCGCAAGGAAATTGAATTGCTAGATAGCATTGATCTTATCCGATGTAAAATATGCCAAACTACAGTTGCGAAGCGAAGTGATATGTTGGTGATGTCAAATGAGGGTCCTCTTGGTGCCTATGTGAATCCCGATGGTTACGTGCATGAGATAATGACTCTTTACAAGGCCAATGGGTTATCTCTCATTGGGCCAGCAGTTACAGAATACAGCTGGTTTCCTGGATATGCATGGACAATCGCTAAGTGTACCATATGTAGAACCCAAATGGGATGGCTTTTTACAGCAACCAGCAAAAAACTGAGGCCCAATTCATTTTGGGGTATCCGGAGCTGTCAAGTTGCAGATGAAATACGCCGAAACCTTTAG 1554 0.4196 MRDAGVIENRRNWEWEMDDIIDDEIEIEEEFPEIEGFQIQHILDDLDFEQEEEEEELFHHPFLHEHNAIPIDSSNEFTFNTSIASLHTYLGDVEDTRHRTAFLDGGAILNLPLFSLQGVVLFPGATLPLRVTVPRFVVAIERAMSQVDVPYTIGVIRVHRDNGSFRKKMASIGTTAVIRQYGRLEDGSLNVVTRGQQRFHLRRCWNDVERGPYGEIQIIEEDLPLRTPRDAFDKSASSSNMLSSRVKMCGLKNGENDSEANSDKGFESELSPIERKIHLPAIGSDQAIRSNLDLSNGNCSTSGKQSSKEELNRCYKNILSHKISKAFWPHWVYRMYDSYTLAQRAADMWKQIVGVPSMDSLIKKPDVLSFHIASKIPVSESTRQELLDIDGIAYRLRKEIELLDSIDLIRCKICQTTVAKRSDMLVMSNEGPLGAYVNPDGYVHEIMTLYKANGLSLIGPAVTEYSWFPGYAWTIAKCTICRTQMGWLFTATSKKLRPNSFWGIRSCQVADEIRRNL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03124 517 Gene3D - 91 219 IPR046336 -
Car05g03124 517 Gene3D Peptide methionine sulfoxide reductase. 402 516 - -
Car05g03124 517 ProSiteProfiles Lon N-terminal domain profile. 111 405 IPR003111 -
Car05g03124 517 SUPERFAMILY PUA domain-like 110 404 IPR015947 -
Car05g03124 517 Pfam ATP-dependent protease La (LON) substrate-binding domain 110 404 IPR003111 -
Car05g03124 517 PANTHER BNAA09G40760D PROTEIN 323 510 - -
Car05g03124 517 PANTHER BNAA09G40760D PROTEIN 30 309 - -
Car05g03124 517 CDD CRBN_C_like 409 505 IPR034750 -
Car05g03124 517 SMART lon_5 110 405 IPR003111 -
Car05g03124 517 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 409 499 IPR004910 -
Car05g03124 517 ProSiteProfiles CULT domain profile. 406 513 IPR034750 -
Car05g03124 517 Gene3D - 337 401 - -
Car05g03124 517 PANTHER CEREBLON 323 510 - -
Car05g03124 517 PANTHER CEREBLON 30 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03124 Car-Chr5 76025944 76031260 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03124 K11793 - gmx:100779918 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03124 05 76025944 76031260 Car05g03124 05 76025944 76031260 ECH