Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03120 ATGGATCGGTTGCGCCCTCGTAACAGAGCCGTCTTTTCTGGTTTCACTAACGCCGAGATTGAGAAAATGGAGAAATTGCTTAGAGAATCAAGAAGACAATCATTCACACCCGATTTTTACCAAAAACTAGCTAAAAGTTTCAACTATTCATCTGGTCGTGCTGGTAAACCTATCATCAAATGGACTGAGATAGAAAGTTGGTTTCAGACTAGGCTCCAAGACTCTCCTCAAGTCCCTGAAAATGAGTTGTTGTCTCCTCAAGGCCTGCAATGTAAGGAAGGAGAAATTATCCGAGACCCATCAGAGTTGGAATTTGAAGCTAGGTCTTCAAAAGATGGGGCATGGTATGATGTTGAGACATTTGTTGATCACAGATTTCTTAGCACAGGGGAAGCTGAAGTCCAAGTCAGATTTGTTGGGTTTGGAGCTGAGGAAGATGAGTGGGTCAACATAAAAAATTCAGTCCGAGAACGCTCAGTTCCTTTCGAAAACACAGAGTGTTCCAACCTGAAAGTTGGAGACCCTGTCTTATGCTTCCAGGAGAGGAGAGATCAAGCTATTTACTACGACGCCCACATTGTAGAGATCCAAAGGAGAATGCATGATATCCGAGGTTGCAGGTGTCACATCTTAATCCGGTATAATCATGACAACTGTGAGGAAAGAGTTCGCTTGAGGAGACTTTGCCGCAGACCAAGATCTTAG 705 0.4369 MDRLRPRNRAVFSGFTNAEIEKMEKLLRESRRQSFTPDFYQKLAKSFNYSSGRAGKPIIKWTEIESWFQTRLQDSPQVPENELLSPQGLQCKEGEIIRDPSELEFEARSSKDGAWYDVETFVDHRFLSTGEAEVQVRFVGFGAEEDEWVNIKNSVRERSVPFENTECSNLKVGDPVLCFQERRDQAIYYDAHIVEIQRRMHDIRGCRCHILIRYNHDNCEERVRLRRLCRRPRS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03120 234 Gene3D - 162 234 - -
Car05g03120 234 Gene3D - 100 161 - -
Car05g03120 234 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 233 IPR039276 -
Car05g03120 234 PANTHER OS09G0346900 PROTEIN 9 233 - -
Car05g03120 234 Pfam SAWADEE domain 102 229 IPR032001 GO:0003682
Car05g03120 234 SUPERFAMILY Chromo domain-like 112 154 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03120 Car-Chr5 75999607 76003697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03120 - - gmx:100801021 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03120 05 75999607 76003697 Car05g03120 05 75999607 76003697 ECH