Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03112 ATGTTCTCCAACCTAAAATCAAGGGAACAGCATCAACAAAAGCAAAAGGGAGAATGGTTATCAGGAAGTTTCAAGCCAGAGAATTTCATTCCAGGTCTTGTCATAGGTTTCATTTGTGGTTTATTGATAGATTTATCAAAGCCAACTAGAAATCACTTGTCCAAGAAAATTTTCTCATCTACAAAGCATCAACACCAACTCTCACTCTCAAGTAATGATGATCAAGACCTTAAATTGATTCTGGTTGTCAGGCAAGACCTAAAGATGAAATCCGGAAAGATTGCGTCTCAATGTGCTCATGCTGCCACTGGCATGTATGCTGAATTAATGCGAAGTGACCGGTCTCTTTTAAGACAATGGGAACAGTGTGGCCAGCCCAAAATTGTTGTAACTTGCAGAAACCAACAAGAAATGAATAAGCTAAAGGAAGCAGCTGAGAGTATTGGCCTCCCCACGTTTGTTGTCGCTGATGCAGGACGAACACAGGTTTCGGCAGGATCGAAGACTGTTCTTGCTGTTGGACCTGGGCCAAAAGCATCTGTGGATTCGGTGACTGGGAGCCCAAATCCTCACCCTTTCTCCTCAAAACTCGTACTTCCGTCACCGTCAGGTCAGTTGCGGAGCTTGGTTGCGTGCAGTCGCTACTTCCATTGCACTCGGCGGTTTCTTCAGCGCGCCTCACTTCTTGCCTCGGCATCGATTCAAGGAGTTCAAAGTCTTTGTCTCAGGGTATGCTTTGCAGTGCCGACCCCGGAGTTTGATTTATCCGATACTTTTTATCTCCTTTCTTATCTAAATGGGACTTGGCACACCACGATAAGAGATTTGGAAGACTGTTTTTTGACAGATCATTGTAACAGTTGTTTCCAAATTCAAACTTTGCCGCCAGGACTTGGTGAATAA 903 0.443 MFSNLKSREQHQQKQKGEWLSGSFKPENFIPGLVIGFICGLLIDLSKPTRNHLSKKIFSSTKHQHQLSLSSNDDQDLKLILVVRQDLKMKSGKIASQCAHAATGMYAELMRSDRSLLRQWEQCGQPKIVVTCRNQQEMNKLKEAAESIGLPTFVVADAGRTQVSAGSKTVLAVGPGPKASVDSVTGSPNPHPFSSKLVLPSPSGQLRSLVACSRYFHCTRRFLQRASLLASASIQGVQSLCLRVCFAVPTPEFDLSDTFYLLSYLNGTWHTTIRDLEDCFLTDHCNSCFQIQTLPPGLGE 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03112 300 CDD PTH2 78 187 IPR002833 GO:0004045
Car05g03112 300 PANTHER PEPTIDYL-TRNA HYDROLASE 2 5 187 IPR002833 GO:0004045
Car05g03112 300 Gene3D Bit1 72 187 IPR023476 -
Car05g03112 300 PANTHER PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL 5 187 - -
Car05g03112 300 TIGRFAM arch_pth2: peptidyl-tRNA hydrolase 77 187 IPR002833 GO:0004045
Car05g03112 300 SUPERFAMILY Peptidyl-tRNA hydrolase II 76 187 IPR023476 -
Car05g03112 300 Pfam Peptidyl-tRNA hydrolase PTH2 77 187 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03112 Car-Chr5 75901714 75908595 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03112 K04794 - gmx:100527852 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03112 05 75901714 75908595 Car05g03112 05 75901714 75908595 ECH