Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03109 ATGGCTCAACTATTCAGAGACCTATCATTGGGTCATTCCAAGAGAGAATTAACACCGTCACCACCGTTAAAGATAATGCCTCCTAAACCACGCGCCGTTATCGACGATCTTCCTTCACCGCTCGGTCAACTCGCCGTTAACTTATCCGATTCGGAACTCACCCTAACCGCTTACGAGATCTTCGTAGCCGCATGCCGCACTTCTTCGGGTAAGCCGCTGAGTTCATCAGTTGCTAACTCGTCCTCGAATAATCATTCTGGTTCACCGAGTCAGAACTCGCTCGCTATTCAGCGATCTTTAACTTCTACCGCTGCTAGTAAGGTTAAGAAGGCTTTCGGTTTGAAATCTCCCGGTTCGGGTTCCAAGAAGAGTCCTGGTTCCGGTTCGGGTCAGGGAGGAAGATTGAAACGGCCGTTAACGGTTGGTGAACTCATGAGGAATCAGATGAGGGTTTCGGAAGCTATGGATTCGCGTGTCAGACGTGCGCTTCTCAGGATTTCGGCTGGACAGGTTGGAAGAAGGATTGAGTCTGTGGTGGTTCCGCTTGAGTTAATGCAACAACTCAAGTCTTCGGATTTTACTGATCAACAAGAGTATGATGAATGGCAGAAAAGGACCCTCAAGGTTCTTGAAGCTGGTCTTATTTTGCATCCTTACATACCTTTGGATAAATCAAACTCTGCTGGGCAGCGGTTGCGGCAGATTATTCATGCTGCTTTGGATAGGCCCATTGAAACTGGGAAGAATAATGAGTCCATGCAGGTTCTTCGTAGTGCTGTCATGTCTCTTGCGAATAGGTCGTATGATGGATCTCTCACTGATTCATGTCACTGGGCAGATGGGATTCCTCTGAATCTCCGGCTTTATGAAATGCTTCTACAATCCTGCTTTGATGTTAATGATGAATCATCGATCATTGATGATTTTGAGGAGCTAATGGAACAAATTAAGAAGACTTGGGGAATACTCGGATTGAACCAGACATATCATAATCTCTGTTTTACTTGGGTTTTATTTCATCGATTTGTTGTCACTGGCCAGATGGACTTGGAGCTGCTGTCTGATGCTGATGGCCAGCTAGCTGAAGTTGCTAAAGATGCAAAGACAACAAAAGATTCCGAATATTCCAAAATTTTGAGTTTCACATTGACTTCGATAATGGGATGGGCAGAGAAAAGGCTTCTTGCGTACCATGAAACTTTTGATCGCGGAAATGTTGAAACTATGGAGGGTATTGTCTCTGTAGGGGTAGCAGCGGCTAAGATATTGGTTGAAGATATATCTAATGAGTATCGCCGGAGGAGAAGAACTGAAGTCAATGTAGCCCGGGAAAGAATTGAAACTTACATCAGGTCATCTCTACGTACTGCCTTTGCCCAGATAATGGAGAAAGCAGATTCAAGCAGGAGGGCATCAAAAAATCAGCCAAATGCTCTCCCTGTCCTTGTCATTCTTGCGAAGGATGTAGGTAGCCTGGCAGTTAATGAAAAGAAAGTGTTCAGTCCAATATTTAAGAGATGGCACCCTTTGGCAGCAGGTCTTGCTGTGGCTACCCTTCATGCATGCTATGGAAACGAATTGAAACAATTCATTTCAGGTATCACAGAATTGACCCCTGATGCTGTTCAAGTGTTAAGAGCTGCAGACCAGTTGGAGAAAGACCTTGTGCAGATAGCAGTTGAAGATTCAGTGGACAGTGATGATGGGGGCAAAGCAATAATCCGTGAGATGCCTCCATATGAGGCTGAAGGTGCAATTGCCAACCTTGTGAAAATATGGATTAAGACTAGAATAGACAGACTGAAAGACTGGGTTGATAGAAATCTGCAGCAAGAGCTTTGGAGTCCACAAGCAAATCAGGAAGGATACGCTCCATCTGCTGTTGACGTTCTGCGAGTCATAAATGAAACTCTGGATGCATTCTTTCAGCTTCCGATACCAATGCATCCTGCATTGCTTCCTGAAGTGATGCATAACCTCGATAGATGCCTTCAATATTATGTTACCAAATCCAAATCTGGCTGTGGATCACGAAATACATTTATTCCAACAATGCCGGCACTGACCAGATGCACTATTGGCTCAAAATTTCAAGGCTTTGGGAAGAAAAAAGAAAAATCTCCAAATTCTCAGAAGAGAAACTCTCAGGTTGCAACAAATGGGGATAGCTCTTTTGGGATACCACAGCTCTGTGTTCGCATGAATACTTTGCAGTGGATCCTGGGTGAATTTGATGTCCTGGAAAAAAGAATAATTACTCTTTTACGGAACTCAGAATCCGCCCGAGAAGAAGATTTTTCAAACGGATTAGCAAATAAGTTTGAGCTATCTCCAGCCGCATGTCTAGAAGGAATTCAGCAACTCTCTGAGGCTGCAGCATATCGAATTGTCTTCCATGATCTAAGCCATGTTTTTTGTGATAGTTTGTATGTTGGAGATCCATCATCTTCCAGGATTGATCCGTTTCTTCAGGAACTTGAGCGGAACTTAATGTTTATCTCAGACAATGTTCATGAAAGACTTCGCACACGTATTATTACTGATATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGTCCCTCTCGGGCTTTTTCCCGAAAGGACTCGCAGATAATAGAGGATGATTTCAAATTTCTGAAGGAGCTGTTTTGGGCGAACGGGGATGGTCTGCCTTCCGAAATAATAGACAAATTTGCAACTACCGTGAGGTCTATCCTTCCCCTTTTCAGGACCGACACAGAGAGCCTCATCGAACAGTTTAGACGGATAACACTTGAGACATATAAATCCTCTGCCAGGTCTAGAATTCCATTACCTCCAACTTCTGGACAGTGGAATCCATCTGAACCAAATACATTATTACGTGTTTTATGCTATAGAAATGATGAATCAGCTTCTAAGTTTCTTAAAAAGACATATGATCTCCCTAAGAAACTTTAA 2958 0.4351 MAQLFRDLSLGHSKRELTPSPPLKIMPPKPRAVIDDLPSPLGQLAVNLSDSELTLTAYEIFVAACRTSSGKPLSSSVANSSSNNHSGSPSQNSLAIQRSLTSTAASKVKKAFGLKSPGSGSKKSPGSGSGQGGRLKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELMQQLKSSDFTDQQEYDEWQKRTLKVLEAGLILHPYIPLDKSNSAGQRLRQIIHAALDRPIETGKNNESMQVLRSAVMSLANRSYDGSLTDSCHWADGIPLNLRLYEMLLQSCFDVNDESSIIDDFEELMEQIKKTWGILGLNQTYHNLCFTWVLFHRFVVTGQMDLELLSDADGQLAEVAKDAKTTKDSEYSKILSFTLTSIMGWAEKRLLAYHETFDRGNVETMEGIVSVGVAAAKILVEDISNEYRRRRRTEVNVARERIETYIRSSLRTAFAQIMEKADSSRRASKNQPNALPVLVILAKDVGSLAVNEKKVFSPIFKRWHPLAAGLAVATLHACYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVDSDDGGKAIIREMPPYEAEGAIANLVKIWIKTRIDRLKDWVDRNLQQELWSPQANQEGYAPSAVDVLRVINETLDAFFQLPIPMHPALLPEVMHNLDRCLQYYVTKSKSGCGSRNTFIPTMPALTRCTIGSKFQGFGKKKEKSPNSQKRNSQVATNGDSSFGIPQLCVRMNTLQWILGEFDVLEKRIITLLRNSESAREEDFSNGLANKFELSPAACLEGIQQLSEAAAYRIVFHDLSHVFCDSLYVGDPSSSRIDPFLQELERNLMFISDNVHERLRTRIITDIMRASFDGFLLVLLAGGPSRAFSRKDSQIIEDDFKFLKELFWANGDGLPSEIIDKFATTVRSILPLFRTDTESLIEQFRRITLETYKSSARSRIPLPPTSGQWNPSEPNTLLRVLCYRNDESASKFLKKTYDLPKKL 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03109 985 PANTHER PROTEIN UNC-13 HOMOLOG 2 985 IPR008528 -
Car05g03109 985 MobiDBLite consensus disorder prediction 699 720 - -
Car05g03109 985 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 542 685 IPR014770 -
Car05g03109 985 MobiDBLite consensus disorder prediction 72 96 - -
Car05g03109 985 Coils Coil 744 764 - -
Car05g03109 985 PANTHER ELONGATION FACTOR TS (DUF810) 2 985 - -
Car05g03109 985 MobiDBLite consensus disorder prediction 111 139 - -
Car05g03109 985 MobiDBLite consensus disorder prediction 1 28 - -
Car05g03109 985 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 816 926 IPR014772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03109 Car-Chr5 75884217 75889555 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03109 - - gmx:100814675 1692.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03109 05 75884217 75889555 Car05g03109 05 75884217 75889555 ECH