Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03099 ATGCTTCATGCTTTGTATTTTCAAAAATCATCTAATCATGGAACCTGGACAGTCATCTACAACAACAAGCATGTTCAAACCGAAACTTACAATCTTGAAAAACAAAGAAACAAACCATTGTTTCTGCCAGCCATAGAAGGCAATTCATTGGCCATTTTGTCTGCTTACCTCTTCAACTGGCTGAGATCTGGAAAAGTAAACAAATACATTAGCAACACCAATGTCTTTGAACATTCAGGGAAGTTTTACTCAATTGCTGAAAGTGACATGCCACAAGAGATTGATATTTTGTCCCTAAAAACTTTAAAAAATTGGGACCTAAGTGCAGCTTGGAATCGACCCTTTACCAGCCATCCAAAGAAAGCTCCAAGTACAGGGGAGCTAGTTACATTTGGTGTGGAACCAACTAAACCTTTTCTTGTTGTTGGAATCATTTCAGCTGATGGAAAAAAGTTGGTTCATAAAGTTGATCTCAAACTAAACAGGTGCAGTCTTGTCCATGACATAGGTGTTACACAAAGGTACAATGTGATAATGGATTTTCCACTGACCATTGATCTAAATAGACTTATAAGAGGAGGACCATTAATAAAGTATAACAAGAAAGAATATGCAAAGATTGGAGTAATGCCACGCTATGGTAATGCTAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACCTTTCACATTATCAATTCTTTTGAGGAAGGAGATGAGGTTGTAGTGAGGGGATGTAGATCTCTTGACTCATTAATTCCTGAACCTGATCTAAGTTCGAATGAATTCAAGTGCTTTTCTCGCTGCCACGAATGGCGATTGAATATGCAAACTGGAGAGGTTAAAGAGAAAGATCTTTGTAATGACAAAGCAGTTTATATGGATTTTCCTATTATACATGAAAATTTTGTAGGTATTAAGAATAGATATGCATACATACAAGTAGTTGATCCAATTTCAAGCTCTACTCAAGATGGGCCAAAATACAGAGGTTTAGCAAAGTTATACTTTGAAGAATCATCTACTGACATCTGTTTGTCGATTAGAGACAAAGATGAACCTATAAGGATGGAATACCATATGTTTGAGAAGAATACATTTTGCAATGGGTCAACATTTGTGCCTAGAGATGGAGGTGTTGAAGAAGATGATGGTTGGATCATTACTTTTGTTCACAATGAAGATACTAACAAATCTGAAGTTCATATAATTGACACACAGAATTTAACTGGTGAGGCAATTGCCAAAATTGGAATGCCTTGCAGAGTTCCATATGGGTTTCATGGAGCTTTCATGCCAATCTCATTCCAGGATCAATAG 1323 0.3673 MLHALYFQKSSNHGTWTVIYNNKHVQTETYNLEKQRNKPLFLPAIEGNSLAILSAYLFNWLRSGKVNKYISNTNVFEHSGKFYSIAESDMPQEIDILSLKTLKNWDLSAAWNRPFTSHPKKAPSTGELVTFGVEPTKPFLVVGIISADGKKLVHKVDLKLNRCSLVHDIGVTQRYNVIMDFPLTIDLNRLIRGGPLIKYNKKEYAKIGVMPRYGNANSIKWFEVEPNCTFHIINSFEEGDEVVVRGCRSLDSLIPEPDLSSNEFKCFSRCHEWRLNMQTGEVKEKDLCNDKAVYMDFPIIHENFVGIKNRYAYIQVVDPISSSTQDGPKYRGLAKLYFEESSTDICLSIRDKDEPIRMEYHMFEKNTFCNGSTFVPRDGGVEEDDGWIITFVHNEDTNKSEVHIIDTQNLTGEAIAKIGMPCRVPYGFHGAFMPISFQDQ 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03099 440 PANTHER BETA-CAROTENE DIOXYGENASE 1 435 IPR004294 GO:0016702
Car05g03099 440 Pfam Retinal pigment epithelial membrane protein 1 434 IPR004294 GO:0016702
Car05g03099 440 PANTHER OS06G0162550 PROTEIN 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03099 Car-Chr5 75756695 75761094 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03099 - - gmx:100817738 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03099 05 75756695 75761094 Car05g03099 05 75756695 75761094 ECH