Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03082 ATGCGCCCACCGGTTATTCTCGAACCTTCCACCACCTATTCTTCTAACTCCTCTTCTTATTCTCCAAGCAGCGATCGAAGGCTAAACACTATTGCAAAACACTTTGTTAATCACGTCCAAATGGATTCTCACAACATTTCTCCTTCTCCAACTGCTTCTTCCGATTCCGTCTTCGCTCAAATCGTTCGTGCTCCCGAAGATGCTATCCTCGGGGTAACTGTCGCTTACAACAAAGACACTAGTCCAATTAAGCTCAATTTGGGTGTTGGTGCTTACCGAACTGAGGAAGGTAAACCCCTTGTGTTGGATGTAGTGAGGCGAGTTGAACACCAACTATTCACCGACGGGTCACGCAACAAGGAATATATTCCAATTGTTGGGCTAGCTGATTTTAACAAATTGAGTGCTAAGCTTATTTTTGGTGCTGACAGCCCTGCTATACAAGAGAACAGGGTTACCACTGTTCAAGGCTTATCTGGTACTGGTTCATTAAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACGAACGGGTTATATATTTGCCACAGCCTACTTGGGGCAATCATATAAAGGTTTTTACCTTGGCTGGTTTAACTGTCAAAACATATCGATACTATGCTCCAGCAACACGAGGGCTTGATTTTCAAGGACTTCTAGAGGATCTTGGTGCTGCTCCATCAGGATCTGTTGTTTTGCTACATGCATGCGCACACAACCCTACTGGTGTTGATCCAACACTTGAACAATGGGAGCAGATTAGGCAGATGATAAGATCGAAATCTCTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCCAGTGGAAGTCTAGATGCAGATGCACAGCCTATTCGTTTGTTTGTTGCTGATGGTGGTGAGTTGCTGGCAGCCCAGAGTTATGCAAAGAACATGGGTCTTTATGGTGAACGTGTCGGTGCCTTGAGCATTGTATGCAAGTCAGCCGATGTTGCAAGCAGGGTTGAGAGCCAGCTGAAACTTGTGATTAGGCCCATGTACTCAAGTCCTCCCATTCATGGTGCATCCATTGTGGCTGCCATTCTCAAGGACCGGGATTTGTACAATGAATGGACTATTGAGTTGAAGGCAATGGCTGATCGCATCATCAATATGCGCCAACAACTTTTTGATGCTTTAAGGGCTAGAGGCACACCAGGTGATTGGAGTCACATTATCAAGCAGATTGGAATGTTTACTTTCACAGGATTGAATCCTGAGCAAGTTTCCTTCATGACTAAAGAGTACCATATATACATGACATCTGATGGGAGGATTAGCATGGCTGGCTTGAGTTCCAGAACAGTCTCACACCTTGCGGATGCAATACATGCAGCTGTAACCCAAGTTGCCTAA 1377 0.4488 MRPPVILEPSTTYSSNSSSYSPSSDRRLNTIAKHFVNHVQMDSHNISPSPTASSDSVFAQIVRAPEDAILGVTVAYNKDTSPIKLNLGVGAYRTEEGKPLVLDVVRRVEHQLFTDGSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHERVIYLPQPTWGNHIKVFTLAGLTVKTYRYYAPATRGLDFQGLLEDLGAAPSGSVVLLHACAHNPTGVDPTLEQWEQIRQMIRSKSLLPFFDSAYQGFASGSLDADAQPIRLFVADGGELLAAQSYAKNMGLYGERVGALSIVCKSADVASRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLYNEWTIELKAMADRIINMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNPEQVSFMTKEYHIYMTSDGRISMAGLSSRTVSHLADAIHAAVTQVA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03082 458 MobiDBLite consensus disorder prediction 1 24 - -
Car05g03082 458 CDD AAT_like 85 438 - -
Car05g03082 458 MobiDBLite consensus disorder prediction 8 24 - -
Car05g03082 458 Gene3D Aspartate Aminotransferase, domain 1 61 450 IPR015422 GO:0003824
Car05g03082 458 Gene3D - 117 358 IPR015421 GO:0003824
Car05g03082 458 PRINTS Aspartate aminotransferase signature 232 251 IPR000796 GO:0006520|GO:0008483
Car05g03082 458 PRINTS Aspartate aminotransferase signature 263 275 IPR000796 GO:0006520|GO:0008483
Car05g03082 458 PRINTS Aspartate aminotransferase signature 331 356 IPR000796 GO:0006520|GO:0008483
Car05g03082 458 PRINTS Aspartate aminotransferase signature 399 417 IPR000796 GO:0006520|GO:0008483
Car05g03082 458 PANTHER ASPARTATE AMINOTRANSFERASE 55 457 - -
Car05g03082 458 Pfam Aminotransferase class I and II 83 450 IPR004839 GO:0009058|GO:0030170
Car05g03082 458 PANTHER ASPARTATE AMINOTRANSFERASE 55 457 IPR000796 GO:0006520|GO:0008483
Car05g03082 458 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 301 314 IPR004838 GO:0003824|GO:0009058|GO:0030170
Car05g03082 458 SUPERFAMILY PLP-dependent transferases 56 454 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03082 Car-Chr5 75618308 75622920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03082 K14454 - gmx:547509 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03082 05 75618308 75622920 Car05g03082 05 75618308 75622920 ECH