LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car05g03076	ATGGCATACCACCTTCTCCTCTTATCTATATCACAATCTGATTTTGCCACTTCAGCTTCTACTACGTCGAAATCATACTTGCAGATCTCATCAATTTCTTCAAAGACGGGGCGAATTAGCCGTGCGGTTATTCTAAGTCAACTTCCAGTGGCCATGGCTCCACCGTTACCGCAATCTCAACGATCTGCCTCTCCGTCGCAACCTTCCGGGAAGAGTGAAGTGTCTGATTTGAAATTACAGCTCCGGCAACTTGCTGGGAGCCGAGCTCCGGGTGCTGATGATTCGAAGAGGGATCTTTTTAAAAAGGTGATATCCAACATGACTATAGGTATTGATGTTTCGTCTCTCTTTGGTGAGATGGTAATGTGTTCGGCAACATCAGACATTGTCTTGAAAAAAATGTGCTACTTATATGTTGGAAACTACGCTAAGGTTAACCCCGATCTTGCTCTCTTGACGATTAATTTTCTACAAAGGGATTGCAAGGATCAGGATCCGATGATTCGGGGACTAGCATTGAGGAGTTTGTGTTCACTCCGAGTGGCGAACTTGGTGGAGTATTTGGTTGGGCCTTTAGGGTCAGGGTTGAAGGACAATAACAGTTATGTCAGGACGGTGGCAGTTATTGGGGTTTTGAAACTGTATCATATATCAGCCACCACATGTATTGATGCAGATTTTCCAGAAACACTGAAGCATTTGTTGCTCAATGATCCGGATACTCAGGTAGTTGCAAACTGCTTGTCTTCTTTACAAGAAATTTGGACTTTAGAGTCAACCAGCTCAGAAGAAGCATCCAGGGAGAGAGAAACTCTGCACAGCAAGCCAATTGTTTATTACCTTTTGAATCGCATTAAGGAATTTAGTGAATGGGCACAATGTCTTGTGATGGAATTGGTGGCCAAGTACATTCCATCAGATAATAGTGAAATATTTGATATAATGAATCTCCTTGAAGATAGACTCCAGCATGCAAATGGTGCTGTCGTCTTGGCAACTATAAAAGTATTTCTGCATTTGACTTTATCTATGGCTGATGTTCATCAGCAGGTATATGAGCGTATCAAAGCCCCTCTCCTAACTCAAGTGAGCTCAGGAAGTCCGGAACAATCTTATGCAATTTTAAGCCACCTGCATCTCTTGGTCATGCGTGCACCTTATATATTTTCTTCAGACTACAAACACTTCTATTGCCAGTATAATGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAACACCTATGAGATAGTGACAGAATTATGTGAGTATGCTGCAAATGTTGACATACCAATTGCAAGGGAATCAATTCGGGCTGTTGGGAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGACCGACTTCTACAATTTCTGGAGATGGAAAAAGACTATGTTACATCTGAAGCTCTGGTTCTTGTGAAAGATCTACTAAGAAAGTATCCACAATGGAGTCAAGATTGTATTGCTGTTGTTGGGAATATCAGTAGCAAAAATGTCCAAGAACCTAAGGCTAAGGCAGCTCTCATATggatgttgggagaatattctcaggacatgcatgatGCACCCTATGTCTTGGAAAGTCTGGTTGAAAATTGGGATGAGGAGCATTCTCCCGAGGTAGTTCGCCTACATCTTCTTACTTCAGTAATGAAGTGTTTCTTTAAGAGACCCCCTGAGACTCAAAAAGCATTAGGAGCTGCACTGGCCGCTGGTCTTGCTGACTTTCACCAGGATGTTCATGATAGGGCCTTATTTTATTACAGGCTTCTACAATACAATGTATCAGTGGCAGAGAGTGTGGTAAACCCTCCAAAACAAGCAGTTTCAGTATTTGCTGATACTCAGAGCAGTGAAGTTAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTTGTATACCAAAAGCCTTCTTACATGTTCACTGATAAGGAACACCGAGGGACACTTGAGTTTTCAGATGAACTTGGAAATCTATCTATTAGTGCAGAATCTGGGGATTCTGTTGTTCCTGCTCAGAGAGTGGAGGAAAATGACAAGGATCTGCTTCTAAGTACCACAGATAAAGATGATGTTAGAGATCCTGGTAGCAATGGTTCTGCATATAATGCTCCTTCCTATAGTGGTTCTGCCCCTTCTGCAACTTCACAACCGCTTGCAGATTTGCCATTTTCAAGTACCAGCGCAACTGGCCAACAAGCTCCAGTTTCTAGCTTGGCAATTGATGATCTGCTTGGTTTAGATTTTCCAGTTGGGATTGCAACCACACCGTCACCTCCCCCATTGACCCTCAACCCAAAAGCTGTACTGGATCCTGGCACTTTTCAGCAGAAATGGCGTCAACTACCAATATCCTTATCAGAGGAATATTCTTTAAGTCCTCATGGAATTGCAACGTTGACAACTCCCAGTGCACTCCTCAGGCACATGCAAAATCATTCGATACACTGCATTGCATCTGGCGGTCAGTCTCCCAATTTCAAGTTCTTTTTCTTTGCTCAAAAAGCGGGTGAAGCATCAATATATCTTGTAGAGTGTATAATCAACACATCATCGGCCAAGTCACAGATTAAAATAAAAGCTGATGACCAAAGCTCATCACAGGCATTCTCAACTTTATTCCAATCAGCCTTGTCCAAATTTGGTTTGCCCTGA	2694	0.4165	MAYHLLLLSISQSDFATSASTTSKSYLQISSISSKTGRISRAVILSQLPVAMAPPLPQSQRSASPSQPSGKSEVSDLKLQLRQLAGSRAPGADDSKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVLKLYHISATTCIDADFPETLKHLLLNDPDTQVVANCLSSLQEIWTLESTSSEEASRERETLHSKPIVYYLLNRIKEFSEWAQCLVMELVAKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATIKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSPEVVRLHLLTSVMKCFFKRPPETQKALGAALAAGLADFHQDVHDRALFYYRLLQYNVSVAESVVNPPKQAVSVFADTQSSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTLEFSDELGNLSISAESGDSVVPAQRVEENDKDLLLSTTDKDDVRDPGSNGSAYNAPSYSGSAPSATSQPLADLPFSSTSATGQQAPVSSLAIDDLLGLDFPVGIATTPSPPPLTLNPKAVLDPGTFQQKWRQLPISLSEEYSLSPHGIATLTTPSALLRHMQNHSIHCIASGGQSPNFKFFFFAQKAGEASIYLVECIINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGLP	897

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car05g03076	897	SUPERFAMILY	ARM repeat	81	651	IPR016024	-
	Car05g03076	897	PIRSF	Beta_adaptin	62	897	IPR016342	GO:0015031\|GO:0030276
	Car05g03076	897	PANTHER	AP-4 COMPLEX SUBUNIT BETA-1	68	895	-	-
	Car05g03076	897	MobiDBLite	consensus disorder prediction	712	741	-	-
	Car05g03076	897	MobiDBLite	consensus disorder prediction	680	741	-	-
	Car05g03076	897	Gene3D	-	65	662	IPR011989	-
	Car05g03076	897	Gene3D	-	766	895	IPR012295	-
	Car05g03076	897	MobiDBLite	consensus disorder prediction	686	708	-	-
	Car05g03076	897	Pfam	Beta2-adaptin appendage, C-terminal sub-domain	778	891	IPR015151	GO:0006886\|GO:0016192\|GO:0030131
	Car05g03076	897	SMART	B2_adapt_app_C_2	775	892	IPR015151	GO:0006886\|GO:0016192\|GO:0030131
	Car05g03076	897	Pfam	Adaptin N terminal region	91	604	IPR002553	GO:0006886\|GO:0016192\|GO:0030117
	Car05g03076	897	PANTHER	ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER	68	895	IPR026739	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car05g03076	Car-Chr5	75550987	75562605	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car05g03076	-		-	gmx:100801153	1512.28

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car05g03076	05	75550987	75562605	Car05g03076	05	75550987	75562605	ECH