Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03075 ATGGTTATCCTTCATATCCCAAGATTATCCTTTTCTCTTTTCACAATCTCATCTCCATTATTCTCTCGTAAAGCCTATTCGTCACGCACGTTAACCACCCTCTTACACCCACCACCTAAATCAACCCTCACAACAACTTCACAACCAACAATAATAAACCCTAAACCCCAAAACCTATCTCTCGATAAACTCTTCGTTCCACCAGAAACCCCCATTATCTCTCTCGACAACGCAAGAATCTTAAACGGTTCCAATATTTTACTAAGTAACTACGCCAACGACGCTCAAATCATACAAGCTGATTTTGTGAAAAGCAGTGTTAGAACTGAAGATTGTCCTTCCGATGGACTTCCTGAATTCGCTCTTGTTGGTCGCTCCAATGTTGGCAAATCTTCGCTTCTCAATTCCATTGTTCGCCGCAAAAAGCTCGCTTTAACTTCAAAGAAACCTGGGAAGACGCAATTGATTAACCATTTTCGAGTTAATGATAGCTGGTACTTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCAGGAACTTAGAATGGATTGGGCAAAATTCACCAAAGACTATTTCCTTAACCGGTCAACATTGGTTTCGGTTTTCCTTCTAATAGATGCTAGCATTCCTGCTAAAAAAATTGATCTCGAGTATGCCGGTTGGTTGGGTCAGAATCAGATCCCAATGACATTAATCTTTACCAAATGTGACAAGCGGAAGAAGAAAAAGAATGGAGGCAAAAGACCTGAAGATAATGTCAATGATTTTCAGGACTTGATACGTGGCTCCTTCGAAACTGTGCCTCCATGGATCATGACGAGTAATGTCACCCATCAGGGTCGCGATGAGATACTTCTTCATATGGCCCAGCTTCGGAACTATTGGCTCAAGCACTAG 903 0.4208 MVILHIPRLSFSLFTISSPLFSRKAYSSRTLTTLLHPPPKSTLTTTSQPTIINPKPQNLSLDKLFVPPETPIISLDNARILNGSNILLSNYANDAQIIQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQLINHFRVNDSWYLVDLPGYGYASAPQELRMDWAKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYAGWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQDLIRGSFETVPPWIMTSNVTHQGRDEILLHMAQLRNYWLKH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03075 300 CDD YihA_EngB 119 293 IPR030393 GO:0005525
Car05g03075 300 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 45 297 - -
Car05g03075 300 Pfam 50S ribosome-binding GTPase 120 237 IPR006073 GO:0005525
Car05g03075 300 Gene3D - 92 296 IPR027417 -
Car05g03075 300 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 116 296 IPR030393 GO:0005525
Car05g03075 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 296 IPR027417 -
Car05g03075 300 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 100 288 IPR019987 GO:0005525
Car05g03075 300 Hamap Probable GTP-binding protein EngB [engB]. 105 294 IPR019987 GO:0005525
Car05g03075 300 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 45 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03075 Car-Chr5 75547867 75550907 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03075 K03978 - gmx:100784426 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03075 05 75547867 75550907 Car05g03075 05 75547867 75550907 ECH