Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03073 ATGGTAGAAGATTCAAAAGGAGATAATCTTGAATTCAAATGGGGAAAAAAGAAAGGGTTTGGTGGTAAAAAAAAGGAAGTGACATTTTACGAATCGTTTACTTACGATGGTGTAGATTACACTCTTTACGATTCTGTGTATCTATATAAGGATGATGAACCTGAACCTTTTATTGGTAAACTAATCAAAATTTGGGAAAATGGTGATAAGAGTAGGAAAGTTAAGATTCTGTGGTTCTTTCGTCCCTGTGAGATTTTAAACTTTTTGGAAGGTTACGAGACGCTTGATAACGAGTTGTTTATGGCATGTGGTGAAGGATTAGGGCTTTCAAATATTAATCATCTGGAAGCTATTGCTGGAAAATGCAATGTTGTTTGCTTTTCTAAGGACGGCAGGAATCCACATCCATTAGATGAAGAACTTCAAAATGCCGACTTTGTATGCTATTGTTTCTTTGATGTTGGGAGGCATAAAATATTGGACAAGACAGATGACAAAATTGCTGGAATTGAAGTTAAAAATATTTTTAACAATTTAGATAGTCAAAAGCTTGGTGGTCTTTTGAGACTTGATTTAGATGGGAAAGATGTTAGTGCTAAAGTCACGACAAATAATGAAGCGGTGGCTCTTTCAAGTGAAAAAAACAATCAGCTTTTGATTGATAAACTAGATGGCAAGCGTTATGACACTGGTGATTCTAAGCCATCATTTGGAGAAAAATGCACCTCTAGCCTTGGTTTAAAGGACGCAAATAAATCGAATGATGGCTTGAACTCTATATCTCGTGACAAGACCTTGCCTCTAGCCAAAGAAAAAGAGAATGGTGTTTGTAAGGCTTTGGCTAAACAAAAATCATCCACCAAACTATCACATTCTTCTAGAGATGGTTTGGAAATGACAGGAAACTCTAAAACCGGAGGCAATGCTTTTTGTTTAGCCAAGATTGATTCAGAAGATACTGTTGGTGTCCCCGATCGACAAATCAACAAGCGATTGGTGGAGGGCAAGGCTTCTGAAAAGGAAAAATACGGCGTTTCTAATGCCATGATAACAAATGATGTGCAAAATCGAAGGAAGCATGATAATGATGTGAAGGAAGTCCCTTCGAAAAAGCTAAAGACCGACACAATGTCAACAAAACACTCTGCTGACAAGTTTCGTAAAGAATCTTCTACAGCTTCTCCAAACGTGGAACACAGGCTAGATTATCGTGTAATGGAAGTTACTCAGAGACCCGATATTGATAGAAGCAAATGGTTTAAACCAATGCCTTGGGAGGAAAGAATGAGAAATGCCCATGAACAAGGAAAACTTGTGCTGCTTGAAAATTTGGATCCTTCTTTAACTTCATCAGAAGTACAGGATATTATTTGGCTTGGCTTTAAAGAAAGTTGTACTGTGATGGTGATCCAGAAAACTGCAGAATCTAGTCCTCATTCTGGTCAAGCTTTTGTTATATTTAAAAGAAAGGAAGCGGCAGAGTCTGTTATTAGAAAATTAGAGGAGGGCTGTTTCTTGATGTCAAATGGGCGCCCACTTGTGGGAAGCTTTGGACTTCCTTGCTTTCCGGAAAAGAAGCCAATATTTTATGGTCATCATGTTAATGATCATCTTCGATTGCAAACACAACGTGAGATGAAAGATGCTGTATCTACTTCACATTGTTCTCAGCCAAACAACATTGAGTACGATATGGCCGTAGAGTGGTGTTTACTCCAAGAAAGAGCAGACAAATCTTGGAGAAGACTGTATCAGCGACAAGGCGAGGAGTTGAGAAAACTCAAAGCTAAGTTGAATGTTAAAATCTAA 1809 0.3803 MVEDSKGDNLEFKWGKKKGFGGKKKEVTFYESFTYDGVDYTLYDSVYLYKDDEPEPFIGKLIKIWENGDKSRKVKILWFFRPCEILNFLEGYETLDNELFMACGEGLGLSNINHLEAIAGKCNVVCFSKDGRNPHPLDEELQNADFVCYCFFDVGRHKILDKTDDKIAGIEVKNIFNNLDSQKLGGLLRLDLDGKDVSAKVTTNNEAVALSSEKNNQLLIDKLDGKRYDTGDSKPSFGEKCTSSLGLKDANKSNDGLNSISRDKTLPLAKEKENGVCKALAKQKSSTKLSHSSRDGLEMTGNSKTGGNAFCLAKIDSEDTVGVPDRQINKRLVEGKASEKEKYGVSNAMITNDVQNRRKHDNDVKEVPSKKLKTDTMSTKHSADKFRKESSTASPNVEHRLDYRVMEVTQRPDIDRSKWFKPMPWEERMRNAHEQGKLVLLENLDPSLTSSEVQDIIWLGFKESCTVMVIQKTAESSPHSGQAFVIFKRKEAAESVIRKLEEGCFLMSNGRPLVGSFGLPCFPEKKPIFYGHHVNDHLRLQTQREMKDAVSTSHCSQPNNIEYDMAVEWCLLQERADKSWRRLYQRQGEELRKLKAKLNVKI 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03073 602 MobiDBLite consensus disorder prediction 357 394 - -
Car05g03073 602 Pfam BAH domain 40 154 IPR001025 GO:0003682
Car05g03073 602 PANTHER PROTEIN ANTI-SILENCING 1 1 599 - -
Car05g03073 602 PANTHER PROTEIN ANTI-SILENCING 1 1 599 - -
Car05g03073 602 Gene3D - 436 509 IPR012677 -
Car05g03073 602 CDD RRM_SF 439 513 - -
Car05g03073 602 Gene3D - 8 162 IPR043151 -
Car05g03073 602 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 437 520 IPR000504 GO:0003723
Car05g03073 602 SMART BAH_4 38 164 IPR001025 GO:0003682
Car05g03073 602 MobiDBLite consensus disorder prediction 280 301 - -
Car05g03073 602 ProSiteProfiles BAH domain profile. 38 163 IPR001025 GO:0003682
Car05g03073 602 SUPERFAMILY RNA-binding domain, RBD 433 509 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03073 Car-Chr5 75496309 75507728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03073 - - cam:101508998 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03073 05 75496309 75507728 Car05g03073 05 75496309 75507728 ECH