Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03072 ATGGGTTGCGCACAATCAAGAATAGAAAACGAAGAATCAGTGGCTCGTTGTAAAGACCGTAAAAACCTGATGAGAGAAGCGGTTGTTGCTCGTAACGCCTTCGCCGCCGGTCATTCCGGTTACGCTATGGCTCTCAAAAATACCGGCGCCGCTCTCTCCGACTACGCTCACGGTGAAACTCACCTCGACGACATCGAACTTCACCCGCCGCCTCTTCACACTTCGCCAAACCCTCCACCGCCACCTCCGCCGCCTATGGAAGATAACCTCCCTCCGCCACCGCCTCTTCCGCCTAACTTCTCCCCTGCTTCGATCAAACGCTCTGTCACCATACCTCCGGTGGCATTGCAGCACCGCAAAAAGGGAAACTCAGTCATCACTGTTGAGGAAAACGACGGCGGTGCGAAGACGGACGACGGGAAGAGTGGCGACGGATCGGTTCACGCGCCGCCTAGTCCGCCGGATAGTAAATCAGTTCCGCCTATGCCGGAATCGAAGAATATGGCTTGGGATTATTTCTTCATGGATATGGAGAATTTGCCAAGAGGTTCTTTGAATGAAGAAGATGAGATTGAAAATGAGAATGATAATTTGGACGGTGATGATGGAGGACACGTGGAAGATGAGATTGAACCAAAGACACCTGAGAAAGTGGAGGTTGAAGTGTACACTAAGGAGCATGAAGCAGATGAAGAGATAAGAGAGAGTAAACACATTGAACATTCTAAAACTGCTCCTGCTGAGTTTAGTTCAATTAAGGTGGCTCCAGCTGTTACTCTCATCCAGATTCTAGGTTCACTTGATGATCATTTTCTTAAAGCTTCTGAGTGTGCTCAAGAAGTTTCCAAGATGCTTGAAGCCACTAGGCTGCATTATCATTCTAATTTCGCCGATAATCGTGGTCACATTGATCATTCCGCTAGGGTCATGCGAGTGATAACATGGAATAGGTCCTTCAAGGGTGTATCCAGTGGAGAAGGTGCAAAAGATGATTTTGATTCAGAAGAGTATGAAACACATGCCACTGTTTTGGATAAGTTGTTAGCATGGGAGAAGAAACTTTATGAAGAGGTCAAGCAAGGTGAGCTTATGAAGTTTGAATATCAAAGAAAAGTTTCAGTTCTGAACAAGCAGAAGAAGCGCGGTGCCAGTGTTGAATCATTAGGAAAAACTAAAGCGGCCGTAAGTCATTTACACACAAGATATATTGTCGATATGCAGTCGATGGATTCAACAGTTTCCGAAGTGAACCATATTCGCGATGCTCAGTTGTATCCAAAACTTGTTTCTCTTGTTGTTGAGATGGCCAATATGTGGGAGAATATGTTCATAAATCATGAGAGCCAGCTGAAAATAGTTACAGACCTCAAATCTCTAGATATTTCTCAAGATCATAAGGAAACAACCAAGCATCATTACGACCGCACCCTGCAGCTTTGGAACGTCATCCAAGAATGGCAGTCACAATTCGAGAAGCTCGTGACTCAACAGAAGCAGTACATCCAAGCTCTTAATAGTTGGCTCAAGTTAAATCTCATTCCCATTGAAAGCAACCTAAAAGAGAAAATCTCGTCCCCGCCAAAAGCTCAGAATCCACCTATCCAAGCCCTTCTCCATGCATGGCACGATTATCTCGACAAGCTTCCCGACGAGCTAGCAAAATCTGCTATATCCTCCTTTGCTGCTTTAAAGGAGAAATGCGAGGAAACTCGAAAGGAATTCTTGAGGAAAAACCAAGCTTTTGAGGAATGGTACCAGAAGCATTTACTAAGGAGAGGGCCCGATGATGCAGAGAGAGGAGAGGAAGGAAATACTAACAATCCGCTCTCAGAGAAGCAATATGTCGTCGGGAGCTTGCAGAAGAAACTAGAAGAAGAAACTGAATCTCACAAAAAACTGTGCGTTCAGGTAAGAGAGAAATCCCTACAGAGTCTCAAAACTCGGTTGCCTGAGCTCTTTCGTGCACTGTCGGATTATACTCATGCCTGTTATGATGCTTATGAGAAACTGAAGTTAATCATACAATCTCAAGGTGGTGGTGTGGCATAA 2049 0.4524 MGCAQSRIENEESVARCKDRKNLMREAVVARNAFAAGHSGYAMALKNTGAALSDYAHGETHLDDIELHPPPLHTSPNPPPPPPPPMEDNLPPPPPLPPNFSPASIKRSVTIPPVALQHRKKGNSVITVEENDGGAKTDDGKSGDGSVHAPPSPPDSKSVPPMPESKNMAWDYFFMDMENLPRGSLNEEDEIENENDNLDGDDGGHVEDEIEPKTPEKVEVEVYTKEHEADEEIRESKHIEHSKTAPAEFSSIKVAPAVTLIQILGSLDDHFLKASECAQEVSKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFKGVSSGEGAKDDFDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVSVLNKQKKRGASVESLGKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVSLVVEMANMWENMFINHESQLKIVTDLKSLDISQDHKETTKHHYDRTLQLWNVIQEWQSQFEKLVTQQKQYIQALNSWLKLNLIPIESNLKEKISSPPKAQNPPIQALLHAWHDYLDKLPDELAKSAISSFAALKEKCEETRKEFLRKNQAFEEWYQKHLLRRGPDDAERGEEGNTNNPLSEKQYVVGSLQKKLEEETESHKKLCVQVREKSLQSLKTRLPELFRALSDYTHACYDAYEKLKLIIQSQGGGVA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03072 682 Pfam BAAT / Acyl-CoA thioester hydrolase C terminal 216 302 IPR014940 -
Car05g03072 682 MobiDBLite consensus disorder prediction 189 205 - -
Car05g03072 682 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 679 - -
Car05g03072 682 MobiDBLite consensus disorder prediction 71 101 - -
Car05g03072 682 PANTHER UNCHARACTERIZED 1 679 - -
Car05g03072 682 MobiDBLite consensus disorder prediction 62 164 - -
Car05g03072 682 MobiDBLite consensus disorder prediction 188 209 - -
Car05g03072 682 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Car05g03072 682 Pfam Protein of unknown function (DUF632) 260 562 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03072 Car-Chr5 75488270 75491677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03072 1 83 Acyl Lipid Metabolism Gene Families AT2G27090 31.325 2.17e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03072 - - gmx:100807189 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03072 05 75488270 75491677 Car05g03072 05 75488270 75491677 ECH