Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03065 ATGGGTATAACAGAAGCATGTTCCCGATTCATCTTAGACTTTTTACAAGCATTCAAAAACTCACCACAAAACTCTATGTCacaacatcacaatcacgatcaacatgaacaaacaacaacatgcaagcaacaaaacaTGCTAAACCTTGATGAAAGGATGGTTAGTGCTCTTGTTACTGTTTTTGGAATGGAAAACAATGGAAAAATCAAGAAAGAAAATGCTAGACAAGTTGTGGAGAAGCTTGGTTTGATATATAGTTCTGATCAGAAGGAAAAGGTTTCAGAAATTGAGGATGATGACGATGAAGTGGGCGTGGAAGAAGTACTTGGTGAATTGGAAGACATGTCAAAGAGAAGTGAGTTATTGGTTGAAGCATTCAAAATATTTGATGAGGATGGTGATGGATATATAGATGCAATGGAGTTGAAAAGGGTGCTTGATTGTTTGGGTTTGGATAAAGGTTGGGATATGAATACAATTGAAAAGATGGTGAAGGTTGTGGATTTGAACTTTGATGGAAAAGTTGATTTTGGTGAGTTTGAATTGATGATGGGAtag 558 0.3262 MGITEACSRFILDFLQAFKNSPQNSMSQHHNHDQHEQTTTCKQQNMLNLDERMVSALVTVFGMENNGKIKKENARQVVEKLGLIYSSDQKEKVSEIEDDDDEVGVEEVLGELEDMSKRSELLVEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMNTIEKMVKVVDLNFDGKVDFGEFELMMG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03065 185 PANTHER CALCIUM-BINDING PROTEIN CML42 101 184 - -
Car05g03065 185 SMART efh_1 121 149 IPR002048 GO:0005509
Car05g03065 185 SMART efh_1 159 185 IPR002048 GO:0005509
Car05g03065 185 Gene3D - 15 185 - -
Car05g03065 185 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 101 184 - -
Car05g03065 185 ProSiteProfiles EF-hand calcium-binding domain profile. 155 185 IPR002048 GO:0005509
Car05g03065 185 Pfam EF-hand domain pair 122 184 IPR002048 GO:0005509
Car05g03065 185 ProSiteProfiles EF-hand calcium-binding domain profile. 117 152 IPR002048 GO:0005509
Car05g03065 185 CDD EFh 122 180 IPR002048 GO:0005509
Car05g03065 185 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
Car05g03065 185 SUPERFAMILY EF-hand 60 184 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03065 Car-Chr5 75445560 75446378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03065 35 184 EF-hand Containing Proteins AT5G44460 36.842 2.69e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03065 - - adu:107470962 257.684