Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03050 ATGGCAGGGCTGAATTTTGAAGCTGAATATGTTGATAGCTTTGATGTTCTGAAAGTTTTTGCAGCTGAAGGTGTTGAATTCCTTTTATCTTGTGAAGGGAAGGTACCTTTGTCTGATTGCAATGGGAAAAACATCTACCTATTTTTCTCTGCCAACTGGTGTAGGCCTTGCAAAGTTTTCATTCCTCATCTTGTTGATCTTTATGAAACACTGAGAAAGAGAGGGATTAGTATAGAGATCATCTTTATCTCCTTTGACCGAGATGAGGATGGTTTTAAAGAACATGTTAAGAGTATGCCGTGGCTAGCTGTCCCATTTGATTTAAATTTGCACAGAAGACTGATTGACAGATATCGGGTTGATCGAATCCCGTCATTCATTCCATTATGTTCTGATGCCTTAACTGTTGAAGAAAACTTGATTGAGTTGATTGAGGATTATGGTTCTGATGCATTTCCTTTCACAAGAAAGAGACACGAGGAATTGAAAGCCATAGATAAAAGAAAACGTGAAGAAGTAAATTTGGAAGAATTATTGACACGCGAAGGACGCAACTTTCTGATTTCAGGAGATGATAGGAAGGTGCTTGTATCTGAACTAGCTGGGAAAACCGTAGGTTTATTTTTTGGCGCCTATTGGTCTCCTCCTTGCCGTGCCTTTGCCATTCAACTTGCAGATGTATACAAAAATCTCAAGGATACAAAAGGCCACTGCCTTGAGATTGTTTTAATTTCAACAGATAGGGACCTTAAAGAATTCAATCTCAACAGAAATAGCATGCCGTGGCTCGCTATCCCGTACGAGGACAGAACAAGGCATGACATTTGTCGAATTTTTGATATAAAGAAAATTCCAGCTTTGGTTTTCATTGGACCAGACGGCAAAGTAATTAGTTTGAATGGAAAGTTTATGGTCTCGTCGTACGGCGCAGAAGCTTTCCCATTTACTGAATCAAGGATAAAAGACTTAGAAGCAGCTCTGAGAAAAGAAGGAAATGCTTTGCCTCAACATGTTGAGGATGTCAAGCATGAACATCTACTCAAATTGGATATGGCCAAAGCCTATGTATGTGATAGCTGTAAGAAACAAGGGAAGTTCTGGACATTCTCTTGTGATGTTTGTGACTATGACCTTCATCCAAGTTGTCTAGAGAAAGTCAACGAAGACCAAAGTTGGTAG 1179 0.3953 MAGLNFEAEYVDSFDVLKVFAAEGVEFLLSCEGKVPLSDCNGKNIYLFFSANWCRPCKVFIPHLVDLYETLRKRGISIEIIFISFDRDEDGFKEHVKSMPWLAVPFDLNLHRRLIDRYRVDRIPSFIPLCSDALTVEENLIELIEDYGSDAFPFTRKRHEELKAIDKRKREEVNLEELLTREGRNFLISGDDRKVLVSELAGKTVGLFFGAYWSPPCRAFAIQLADVYKNLKDTKGHCLEIVLISTDRDLKEFNLNRNSMPWLAIPYEDRTRHDICRIFDIKKIPALVFIGPDGKVISLNGKFMVSSYGAEAFPFTESRIKDLEAALRKEGNALPQHVEDVKHEHLLKLDMAKAYVCDSCKKQGKFWTFSCDVCDYDLHPSCLEKVNEDQSW 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03050 392 PANTHER THIOREDOXIN 1 385 - -
Car05g03050 392 SUPERFAMILY Cysteine-rich domain 334 383 IPR046349 -
Car05g03050 392 SUPERFAMILY Thioredoxin-like 35 132 IPR036249 -
Car05g03050 392 Pfam Thioredoxin-like 202 296 IPR012336 -
Car05g03050 392 Pfam Thioredoxin-like 43 127 IPR012336 -
Car05g03050 392 Gene3D Glutaredoxin 21 158 - -
Car05g03050 392 ProSiteProfiles Thioredoxin domain profile. 145 325 IPR013766 -
Car05g03050 392 SUPERFAMILY Thioredoxin-like 189 297 IPR036249 -
Car05g03050 392 Pfam C1 domain 342 382 IPR004146 -
Car05g03050 392 PANTHER NUCLEOREDOXIN 3-RELATED 1 385 - -
Car05g03050 392 Gene3D Glutaredoxin 179 317 - -
Car05g03050 392 ProSiteProfiles Thioredoxin domain profile. 16 142 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03050 Car-Chr5 75337845 75341269 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03050 K17609 - gmx:100778160 684.485