Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03043 ATGGAAGATTCTCACTATTACGACGTCATTATCATCGGAGCTGGCATCATGGGCAGTTCCACCGCCTACTACGCCGCCACACGCGGCCTCAAAACCCTTTTACTTGAACAGTTCGATTTCCTCCACCACCGTGGTTCCTCCCACGGCGAATCTCGCACCATTCGTGCAGCCTATCCTCAACACTATTACTATCCTTTAGTCATCAAATCTTATGAACTCTGGCAACAGGCCCAAGCCCAAGCAGGCTACAACGTCTACTTCAAAGCCCATCATTTCGACATGGCCCCGTCCAACGATCCCACCATGCTCGCCGTCATCAACAGTTGCCGAGAAAACAACGTATCTTATGAACTCCTCCGCCGCGATCAGGTCGCCGATAAATTCTCCGGCCGCATCGACATTCCAGAAGATTGGGTTGGTCTCTCAACAGAGCACGGCGGCGTAATAAAAGCTACAAAAGCGGTGGTGATGTTTCAGACACTGGCGCGGAACAACGGCGCCGTTTTGAAAGACAATGCAGAAGTTACAGACATCAAAAACGACGGTGGCGTTGTCGTTTTAACAAAAAGCGGTGAAAAGTTTCGCGGGAAAAAATGCGTTGTTACAGTTGGAGCATGGGTGAATAAATTAGTTAAAAAAATCAGCGGAGTTGAAATACCGATACAACCATTGGAAACTCACGTTTGTTATTGGAGAATAAAGGAAGGGCACGAAGGGAAATTCACACTTGGGAGTAGCGATTTTCCAACTTTCGCTAGTTGTGGAAAGGTTACTGTTTACGGAACACCTGCGTTTGAGTATCCGGGTTTGGTTAAAGTTGCGGTTCATGGTGGTAACCCGTGTGACCCGGATAAGAGATCGTGGGGCCCACTTGTTATGATGAATGAGCTGAAGGAGTGGGTTGAAGGGAGATTTTCTGGTTTGGTTGATTCGAGTGAACCTGTGGTGAAACAATCCTGCATGTATTCAATGACACCTGATGAGGATTTTGTGATTGATTTTTTGGGTGGTGAGTTTGGGAAGAATGTGGTTTTGGGTGGCGGGTTTTCGGGTCATGGGTTTAAGATGGCTCCTGTTATTGGTAAGATATTGACTCAACTCGCGCTGGATGGGGAAACTAATGAGGTTGATTTGAAACATTTCAGGATTGGAAGGTTCAACGTGGCATCTAAGGTTTAG 1179 0.4707 MEDSHYYDVIIIGAGIMGSSTAYYAATRGLKTLLLEQFDFLHHRGSSHGESRTIRAAYPQHYYYPLVIKSYELWQQAQAQAGYNVYFKAHHFDMAPSNDPTMLAVINSCRENNVSYELLRRDQVADKFSGRIDIPEDWVGLSTEHGGVIKATKAVVMFQTLARNNGAVLKDNAEVTDIKNDGGVVVLTKSGEKFRGKKCVVTVGAWVNKLVKKISGVEIPIQPLETHVCYWRIKEGHEGKFTLGSSDFPTFASCGKVTVYGTPAFEYPGLVKVAVHGGNPCDPDKRSWGPLVMMNELKEWVEGRFSGLVDSSEPVVKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGGGFSGHGFKMAPVIGKILTQLALDGETNEVDLKHFRIGRFNVASKV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03043 392 Gene3D - 7 374 IPR036188 -
Car05g03043 392 SUPERFAMILY FAD/NAD(P)-binding domain 7 386 IPR036188 -
Car05g03043 392 SUPERFAMILY FAD-linked reductases, C-terminal domain 223 326 - -
Car05g03043 392 Pfam FAD dependent oxidoreductase 8 367 IPR006076 GO:0016491
Car05g03043 392 TIGRFAM soxA_mon: sarcosine oxidase, monomeric form 7 391 IPR006281 GO:0008115
Car05g03043 392 Gene3D - 90 324 - -
Car05g03043 392 PANTHER PEROXISOMAL SARCOSINE OXIDASE 4 389 - -
Car05g03043 392 PANTHER PEROXISOMAL SARCOSINE OXIDASE 4 389 IPR045170 GO:0016491|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03043 Car-Chr5 75275897 75280028 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03043 K00306 - gmx:100789864 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03043 05 75275897 75280028 Car05g03043 05 75275897 75280028 ECH