Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03032 ATGGAAGCGTCTTCATCATCAGCGATAGCACAGCAAACATGGGAATTAGAAAACAACATAATCCCAATGGACACACCCGCAGACGATTCCATTTTCCACTACGACGAAGCAGGCCAAAACGAATTCCAACGCGACAAGCCATGGGCAAACGATCCTCATTACTTCAAGCGCGTTAAGATCTCcgcactcgctttactcaagatggttgttcacgcgcgctccggtggtaccatcgAAGTTATGGGACTCATGCAAGGTAAAACCGACGCCGATTCCATCATCGTTATGGATGCTTTTGCTTTACCTGTTGAAGGCACTGAAACTCGTGTCAATGCTCAAGCTGATGCCTATGAATATATGGTCGATTATTCTCAAACAAACAAACAGGCTGGAAGATTGGAAAACGTTGTGGGATGGTATCATTCTCATCCTGGTTATGGTTGTTGGCTATCGGGGATTGATGTTTCGACACAGATGTTGAATCAGCAATTTCAGGAACCATTTTTGGCTGTTGTTATTGATCCAACCAGGACTGTTTCTGCTGGTAAAGTTGAAATTGGGGCTTTCAGGACTTATCCTGAAGGCTATAAGCCTCCTGATGAACCTATTTCTGAGTATCAAACTATTCCTCTTAATAAGATTGAAGATTTTGGCGTTCATTGTAAACAGTATTATTCTTTGGATATCACTTACTTTAAGTCTTCTCTTGATTCACACCTCTTGGATTTGCTGTGGAACAAATATTGGGTGAATACACTCTCATCTTCTCCTTTATTGGGCAATGGAGACTATGTAGCTGGACAAATCTCGGATTTAGCTGAAAAGCTAGAACAAGCAGAGAATCAATTGGCACACTCACGTTTTGGGCCACTAATTGCACCTACACCTAGAAAGAAAGAAGAAGAATCTCCTCTCGCTAAGATCACCCGTGATAGTGCAAAAATAACGGTGGAGCAAGTGCATGGTTTAATGTCACAGGTAATTAAGGACATTCTGTTCAACTCTGTTCATCAAGCAAACAAGTCTCGTACAGATACAACATCTGGCCCTGAGCCAATGATTGAAAGCTGA 1071 0.3968 MEASSSSAIAQQTWELENNIIPMDTPADDSIFHYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADSIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTPRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANKSRTDTTSGPEPMIES 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03032 356 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 55 166 IPR000555 GO:0005515|GO:0008233|GO:0008237
Car05g03032 356 SUPERFAMILY JAB1/MPN domain 57 194 - -
Car05g03032 356 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 22 350 - -
Car05g03032 356 CDD MPN_RPN11_CSN5 47 319 - -
Car05g03032 356 PANTHER BNAC07G13420D PROTEIN 22 350 IPR037740 GO:0004222|GO:0008180
Car05g03032 356 Pfam Cop9 signalosome subunit 5 C-terminal domain 254 334 IPR040961 -
Car05g03032 356 Gene3D Cytidine Deaminase, domain 2 2 260 - -
Car05g03032 356 ProSiteProfiles MPN domain profile. 58 195 IPR037518 -
Car05g03032 356 SMART pad1_6 57 194 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03032 Car-Chr5 75173558 75178378 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03032 K09613 - gmx:100784909 686.797