Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03030 ATGGGTTTGAGAAATCCCTCTATTCTGTGGTTGGCACTTATGTTGTCTTTCTCTTCCGCCATTAACTGTTTGGACATCACAAAAACTTTGGAACAATACCCAGAATTCTCAACGTTCAACAAATACCTAACCGAAACCAAGTTGGTTGAACAAATTAACGGCGCTAAAGCCGTTACAGTTCTCGCTATTGACAACAAGGATATCGCTTCCCTCTCTGGAAAATCCCTTGACGCCGTTAAAACCGTGATTGGGACCCACGTTGTAACCGAATTTTACGATGAAAAGAAACTTGTTGAAGCCGTTGGAAGCCACGCAGAATTGGCTACACTCTCAACGGCTTCAGGTTTAGCTAGCAAAATCTACGTGGGACTTATTAATGAGGGTGAGGTGGCATTTAGTTCCGCTGTTCAAGGCGCAACTTTCGATGCTAAACTTGTTAGAACCGTTACGACTCAACCCGACACCGTTTCGGTTCTTCAGGTTACTCAACCAATTGTTAAGGTTGCTGAATCTTCAACACCTGTGACACCTAATGGAGTTGAAAAGGAAGTACCAACATCTTCTATTGTTGCTGAGTCACCTAAGAGCATTGGTGCTGAAGCACCTGCTCCTAGCAGTTCTTCACGTACCACTTTTGGATTCGTTGGTGCTGTTTTGGCCTTTGCTTCCGTTTTTGTCTCTTTGTAA 687 0.4381 MGLRNPSILWLALMLSFSSAINCLDITKTLEQYPEFSTFNKYLTETKLVEQINGAKAVTVLAIDNKDIASLSGKSLDAVKTVIGTHVVTEFYDEKKLVEAVGSHAELATLSTASGLASKIYVGLINEGEVAFSSAVQGATFDAKLVRTVTTQPDTVSVLQVTQPIVKVAESSTPVTPNGVEKEVPTSSIVAESPKSIGAEAPAPSSSSRTTFGFVGAVLAFASVFVSL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03030 228 Gene3D FAS1 domain 24 180 IPR036378 -
Car05g03030 228 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 4 204 - -
Car05g03030 228 MobiDBLite consensus disorder prediction 172 193 - -
Car05g03030 228 ProSiteProfiles FAS1/BIgH3 domain profile. 23 165 IPR000782 -
Car05g03030 228 MobiDBLite consensus disorder prediction 172 208 - -
Car05g03030 228 SUPERFAMILY FAS1 domain 30 124 IPR036378 -
Car05g03030 228 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 204 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03030 Car-Chr5 75154584 75155506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03030 - - mtr:MTR_3g108760 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03030 05 75154584 75155506 Car05g03030 05 75154584 75155506 ECH