Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03025 ATGCCTCTAGGAGATAGAGGAAGTGATAAGAGCGAAGCTCGTTTCTGCGGCGTAGAAACGGACTTCAACGATGATATGCCTCAAGTTCTTTCGTTCAATCTCTCCACTGGAGGATTCGATTTCGTCGTTGCTCCTCTGATGGATCCTTCCTACAGGCCAAGCTTAGTGCAAAATAATAGTTTGGGATCTGGTGCCCTGCCATTTGCTGCGTCAGACCTGGTCCTGAGTCCATCCCAGTGGAGTAGTCACGTAGTTGGAAAAATCAGCTCTTGGATTGACTTGGATTCCGACGATGAGACACTAAGAATAGATTCTGAAACCACTCTTAAACAAGAAATTTCCTGGGCTTCTCATCTCTCATTACAGGCTTGCCTGCTTCCTGCCCCTAAAGGAACCTCTTGTTCTAATTATGCACGGTGTGTGAACCAAATCTTACATGGCCTGAGTAATATGCAGTTGTGGCTTAGAATTCCCTTGGTGAAGCCCgatgatgactctgtggatgcaaagcctgccactttgGTTGACTCCTGGGAAATATGGAATTCATTTCGCCTTCTGTGTGAGCATCACGGGCAACTGTCAGTTGCATTGGATATTTTGAGTACTATGCCTTCAGCAAATTCCTTAGGACGGTGGTTTGGGGAGTCTGTTAGAGCAGCTATTATAAATACTGATTCCTTTTTAACCAATGGTCGCGGATATCCATGCCTCTCCAAGCGCCATCAGATTTTTATTAATCGGTGTTTTAACCATTCTATACAGATTATTATATCTGGAAACTCTGGTCATCCTAAGGCAAGTGCGGATTCCAATGATTTTCATAATTATTCTGTTGCAGATTTACAAAGGCATCCCTTGCGTCAATATCTGGAATATGTTGGACATCTATACCAAAAATTGGATCCTCTTCCTGATCAAGAACGTTTTGAGCTTGGATACAGGGATTTTTTACAGTCACCCTTGCAACCTTTGATGGATAATTTGGAGGCTCAGACTTATGAGACATTCGAGAAAGATGCTATGAAATACCTTCAATACCAAAGAGCAATTAGTAAAGCATTGCTAGACATGATTCCCGATGAGGAGGCATCTGTTAAAACCATTGTACTGATGGTTGTTGGAGCTGGACGTGGTCCCCTTGTGCGGGCATCATTACAGGCTTCAGAAGAAACTGGGCGAAAACTAAAAGTTTATGCTGTTGAAAAGAATCCGAATGCAGTTGTCACCCTCCACGCATTAGTTAGATTAGAGGGATGGGAGGATACTGTTACCATAGTCTCAAGTGACATGCGCCATTGGAACGCCCCTGAGAAAGCTGACATATTGGTTAGTGAATTGCTAGGTTCTTTTGGGGATAATGAACTGTCTCCTGAGTGCCTTGATGGAGCTCAGAGATTTTTAAAGCCAGATGGAATTTCAATACCATCTTCGTATACAAGTTTCATCCAACCAGTGACGGCTTCAAAGTTATATAATGATGTTAAGGCTCATAAAGATGTTGCACACTTTGAAACTGCTTATGTTGTGAAAATTCACAATGCAGCTCGACTTGCGCCATGCCAATCTGTTTTTACATTTACTCATCCAAAACCAGTTGTCGATAGAGAGAGCAATCAACGTTATAAGAAGTTGCATTTTATGATACCTAATGACACTGGCTCTGCAATGGTACATGGATTTGCTGGCTACTTTGATGCAACTCTTTACAAGGATGTTCATCTTGGGATTGAACCTTCAACAGCTACACCAAACATGTTCAGCTGGTTTGCAATATTTTTCCCTCTAAGAACACCTATTTGCGTGAAACCAGGTTCAAAACTCGAAGTAGATTTTTGGCGCTGTTGTGGCACTACAAAGGTTTGGTATGAGTGGTGTGTTACATCTCCTTCGCCATCTCCAATCCACAACATTAATGGACGGTCATACTGGGTTGGGCTTTAG 1944 0.4177 MPLGDRGSDKSEARFCGVETDFNDDMPQVLSFNLSTGGFDFVVAPLMDPSYRPSLVQNNSLGSGALPFAASDLVLSPSQWSSHVVGKISSWIDLDSDDETLRIDSETTLKQEISWASHLSLQACLLPAPKGTSCSNYARCVNQILHGLSNMQLWLRIPLVKPDDDSVDAKPATLVDSWEIWNSFRLLCEHHGQLSVALDILSTMPSANSLGRWFGESVRAAIINTDSFLTNGRGYPCLSKRHQIFINRCFNHSIQIIISGNSGHPKASADSNDFHNYSVADLQRHPLRQYLEYVGHLYQKLDPLPDQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDAMKYLQYQRAISKALLDMIPDEEASVKTIVLMVVGAGRGPLVRASLQASEETGRKLKVYAVEKNPNAVVTLHALVRLEGWEDTVTIVSSDMRHWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIPSSYTSFIQPVTASKLYNDVKAHKDVAHFETAYVVKIHNAARLAPCQSVFTFTHPKPVVDRESNQRYKKLHFMIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRTPICVKPGSKLEVDFWRCCGTTKVWYEWCVTSPSPSPIHNINGRSYWVGL 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03025 647 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 1 647 IPR025799 GO:0016274|GO:0018216
Car05g03025 647 Coils Coil 647 647 - -
Car05g03025 647 Pfam PRMT5 TIM barrel domain 38 300 IPR035247 -
Car05g03025 647 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 318 625 IPR025799 GO:0016274|GO:0018216
Car05g03025 647 Gene3D - 14 306 - -
Car05g03025 647 Pfam PRMT5 arginine-N-methyltransferase 307 475 IPR035075 -
Car05g03025 647 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 647 - -
Car05g03025 647 Gene3D - 478 646 - -
Car05g03025 647 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 333 646 IPR029063 -
Car05g03025 647 Gene3D Vaccinia Virus protein VP39 310 477 IPR029063 -
Car05g03025 647 PIRSF PRMT5 3 647 IPR007857 GO:0006479|GO:0008168|GO:0035246
Car05g03025 647 Pfam PRMT5 oligomerisation domain 478 645 IPR035248 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03025 Car-Chr5 75100961 75110909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03025 K02516 - gmx:100782245 1140.56