Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03023 ATGGATGATAATCAAGTGAATCAAAACCTAGTTGAACCGCCACGTgaggaagaggaggaagaagaagaagaTTCTTCTAAGATGGAAGAAAAAGAGCTGATTGCCAAGGTTAATAAACTCATGGACAAAATCACTTCTTCTCCTGATAACCCTAAACCCACCGTTCTTCATGCCCTTGCTTCAATTCTTGAAACTCAAGAGTCTCGATACATGGATGAAAATGGTCATTCTTCTTCTACTAATGCCCGTGCTGCCCATAACATTGGCCGCCTAGGGAGTATAATTCGGGAAAATGATGATTTCTTTGAGTTAATATCTTTGAAGTTTCTGTCAGAAAACAGATACTCCACTTCTGTTAAAGCTGCCGCCTCAAGACTTCTATTGTGTTGTTCTCTAACTTGGATTTATCCTCATGTTTTTGAAGAACCGGTCCTTGAGAACATAAAAAATTGGGTGACGGATGATAATACTAGATTGTCTGGTGAGGAGCAAAATCTCAAGCGTGATCTGGGGAGAAAGGAGGTCTCAGATTCTGAATTGTTGAAAACCTATTCTACTGGACTCCTTGCTGTGTGTTTGGTTGGCGGAGGTCAAATAGTGGAAGATGTATTAACATCTGGTTTGTCAGCTAAGCTCATGCGATATCTTCGTTCGCGTGTACTGGGTGAGACAAGTGGCAGCCAAAAAGATATAGGTCATTTATCAGAGAACAAACATTCATCTGGGAGTACTTCAGTGAGAGGTAGAGATGATGGCCGTGGAAGGTTTCGACAGCTCCTGGAATCGAGTCATTTGGACGATACAAGGATGGTTGAAGAGAGATCTTTAGATGACCAAGCTCTTGAAAGGGGTCAGGATAGAAGCGTTAGTGGACAAGCTTGCATAGACGGTGAACCAGCTGATGGACTCAGTGAAGGTGCTGATGTCTGTGAGGTTGATTCTGATGGGGAGGAGAGATGGCACTGTAGAGATATTCGTGATGGAAGGATAAAATATGGTGAGCATGAAGACAATGCTAGAGACGACCCTTCAAGGCGGCGTGCTAACCGTGGATGGGGAAGATCTAGAGCGAAAGGAAGGGTCAATGAAGGGGTGGTAGAAAGTGAACCTGTTTTGCAATCTGCTGGTTCCGGCAGCCGACTAGGACAGGGGCGGAATGGTAGAGATAGGAGCTCGTCAAGGAATGCTGATGTTAAGCGGGGGCCTGATTCTAAGAAGACCCTTATTAGTACCATTTCCGAGGCTTTGGCTTCTGAAAGAGAGGATACTGATGATTGTTTCCAAGAATGCCGTATTGGAAGTAAAGATATCTCTGATCTTGTTCGGAAAGCAGTCCTAGCTGCTGAAGCTGAAGCTAGATCAGCCAATGCACCAGAAGAAGCTGTCAAAGCAGCTGGCGATGCTGCTGCTGACCTTGTTAAAACTGCAGCTTCAGAGGAATATAAATCCACCAATGATGAAGAAGCAGCTGTTTTAGCTGCTTCGAGAGCTGCAACAACCGTTATTGATGCTGCATCTGCTGTTGAAGTTTCAAGGAGCTCCTCCGTCTGCATCAATACTGAGACAGAGAAGGTTAGTCACAGAGAAACAGAATCTAGTGACGACGTTCAAGATTGTTTCATCCCAGATGGTCAATCACTTGCACAATTGAGGGAAAGATATTGCATCCAGTGTCTTGCGTTACTTGGAGAATATGTGGAAGTTCTTGGACCTGTATTGCATGAGAAGGGGGTTGACGTGTGTCTCGGACTTCTGCAGCAAAATTCTAAACATCAGGAGCCATCCAAGGTTGCTTTCCTGTTGCCTGATATCATGAAGCTGATATGTGCTTTGGCTGCCCATAGGAAATTTGCTGCACTCTTCGTGGACCGCGGGGGAATGCAAAAGCTGCTTGCTGTGCCTAGAATGGCTCAGACATTCTTTGGCCTCTCTTCTTGTCTATTTACCATTGGTTCCCTTCAGGGGATAATGGAACGGGTTTGTGCACTTCCATCCGATGTCATTTATCATGTGGTCGAGTTGGCTCTCCAACTCCTTGAGTGCAACCAAGACCAAGCCCGGAAAAATGCAGCATTGTTTTTTGCTGCTGCGTTTGTCTTCAGAGCAGTTCTCGATGCTTTTGATTCTCAGGATGGGTTACAGAAATTACTCGGACTTCTAAACGACGCCGCTTCTATAAGATCTGGAGTAACCTCTGGAGCATTGGGTTCATCCAACTCAGGATCACTTCGAAATGATAGAACATCATCTGCAGAAGTGCTGACATCGTCTGAGAAGCAGGTAGCCTATCACACTTGTGTTGCTTTGCGGCAATATTTCCGGGCACACCTCCTTTTATTAATAGATTCCATTCGTCCAAACAAAAGCAAATTCAGTGCTCCTAGAAATATTTCTAGTATAAGGGCTGCTTACAAGCCACTAGATATTAGCAATGAGGCAATGGATGCTGTATTCCTACAATTACAAAAAGATCGGAAGCTATGTCTCGTGTTCGTGACAACAAAGTGGCAGGAAGTTGAGAAATTCTTGGCATCTAATGGGCATATCACTATGTTGGAACTGTGTCAGGCCCCACCTGTGGAGCGATATCTACATGATTTGCTTCAGTATGCATTAGGGGTTTTGCAAATTGTTACATTAGTACCTAGCAGTCGAAAGATGATTATAAATGCAACATTAAGCACCAATCGTGCTGGTATTGCTGTAATTCTGGATGCAGCAAATATTGCCAGTAATCACGTGGACCCAGAGATAATTCAACCAGCATTAAATGTTTTAGTTAATCTTGTTTGTCCACCTCCTTCTCTCAATAAATCCCAAACCTCAAATGGTGTTCTCTCAGAGGCTAGAGATAGAAATGCTGAACGTAATAATACCATAGATCAATCTGCTCAAGTTTCCAGCCATATTGATCCTAGGGAGAGGAATGGAGAGTCAAGTGCTGTAGACCGAGGCAGTGCTGCAGCACTTACTATGAAATCTGTTACTAGTACTCCACAAGCTTCTGCTCCCTCTGCTACATCAGGTTTGGTTGGTGACCGAAGAATATCTCTGAGATCAGGAACACCTCAGAGATCAGGAGTACCTCAGAGATCAGGGGAAAGTTGTACCGGCCTTGCTACACAGATGGAAACAGGATATCATCAGGCAAGAGAGGCTGTCCGTAATAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCGCGTATATATTCTCCTCCTGCTGCTCTGGACTGTCTTCGTGCACTTGCATGTCGAGTGCTTCTTGGATTAGCCAGAGATAATACTATTGCACATATATTGACAAAACTTCAGGTTGGGAAAAGGCTGTCAGAACTAATTCGGGATTCAGGCAGCCCGTCACTTGGAACAGAGCAGGGTAGGTGGCAAGCTGAATTATCCCAGGCTGCAATTGAGCTAATTGGGATTGTGGCTAATTTAGGGCGTGCAAGTACATTAGTTGCTAGTGATGCAACTACTACTGCAATTGGGCGCATAGAAAGGGCTGCTATAGCTGCTGCCACTCCTATTACTTACCCTGGAAGTGAACTTTTGCTATTAATTCATGAACACTTACTGGCAACTGGATTGGGACAAACTGCTGCTTCATTGCTTAAGGAAGCTCAATTAACTCCTTTGCCACCATTGCTTGCCCCATCTTCTCTTGCACAACAGCCCACCACACAGGAATCTTCTTCAACACAAATTCAGTGGCCCTCTGGTCGTACTCCTGGTGGATTTCTCTCTAGCAAGTTAAAGTTAAAGCCCAATGCAAAGAACGAGGATGCCTGCTTGAAAAGTGATGTTGTTTTCTCTGCAAAGAAAAAGTCACTAACTTTCTCATCATCTTTCGGTTCCCATTCAAAACACCAAGTCAGTGACTCTCGACAGTCATCATCAGTCAGAAAATGGTTCCGTACTGGGAAAGAGGCCTCAGAAACTAATATAGTAGAGAATCCATCTGAATCTTCTGTGAAACATGACACTGATGCTGGATCTCAGTACAAGACTCCAAACACCTTGCCATCCAAACGGAAGTTATCGGATTTAAAGGATATACCAATGTTTTCTTCATCTGGAAAGCGACTAAATGTTGGGGATCAGGGACTTCGCACTCCGATTTGCTCAAGTGCAGTTCGTAAAAGCAGCCTGCAGTCTGATGGTGTGGGGCTATCCACACCAACTTGTAATCTGAGGAATCAACAAGGCCGCTGTACAGCTGACAATGTTGATGAGAATCAGTACTCAAATCTAGGTCAGATGACACCATCCTCCCAAGTATTGAATGACCTTCAGCCCAACAACCCTGAGCGAGTGACACTGGATTCTCTAGTAGTTCAGTATCTGAAACATCAGCATCGCCAATGCCCCGCCCCCATTACCACCCTTCCTCCAATATCTCTTATGCACCCACATGTTTGTCCTGAACCTAAGCGAAGCCTGAATGCCCCTTCTAATGTGACCGCTCGGCTTGGTACCCGTGAATTTAAGTTTACATATGGTGGAGTACATGGTAATCGCAAGGATCGTCAATTTGTTTTTAGCCGGTTTAGGCCATGGCGCACTTATCGGGATGATGCAGGTGCATTATTAACGTGCATTACATTTGTTGGAGACTCTTCTCATATTGCCGTTGGTAGCCATACTGGAGAACTCAAATTTTTTGATTCCAACAACAATAATGTGGTGGAGAGCTTCACGGGCCACCAGTCTCCTTTGACCCTCGTTCAGTCTTATGTTTCTGGTGAGACCCAGTTGTTGCTTTCTTCATGCTCTCAAGATGTTAAGCTGTGGGATGCGACATCAATCTTAGGTGGTCCCACCCATTCATTTGAAGGGTGCAAGGCTGCCAGGTTTAGTAATTCCGGGAATGTTTTTGCTGCCTTGTCATCAGAATCTGCAGGGCGTGAAATCCTTTTATATAATATCCAAACTTGCCAGCTAGAAACAAAATTGTCCGATACATTTGCTCCTTCTACAGGGCGGGGTCATCTTTATTCTTTAATTCACTTCAGCCCTGCTGATTCAATGCTGCTATGGAATGGTGTCTTATGGGACCGACGAGATTCTAGGCCTGTTCATCGATTTGATCAGTTCACTGATTATGGCGGTGGTGGCTTTCATCCTGCTGGCAATGAGGTTATTATAAACTCTGAAGTCTGGGATCTGCGAAAGTTCAGACTTCTACGCCAAGTAGCTTCTTTAGATCAAACAGCAATAACATTTAATGCTCGAGGTGATGTTATGTATGCAATCTTAAGGAGAAATCTTGAGGATGTAATGTCAGCAGTGAACACACGTCGTGTTAAGCACCCACTTTTTGCAGCTTTTCGCACAGTGGATGCAATCAATTATTCTGACATCGCTACTACTCCTGTGGATCGCTGTGTACTTGATTTTGCAACTGAGCCAACAGATTCATTCGTTGGTTTGATTACCATGGACGATCAAGGTGAGATGTATTCATCAGCCAGATCCTATGAAATTGGTCGCCGGAGGCCAACtgatgatgattctgatcccgatgatgctgagagcgaggaggaagacgaggatgatgacgatgacgatgaagatcctcttttaggccctggttttggtggggaaagcgacagtgatcctgatgacttgagcaatgacgacgacgaggatagtgtaagtgagcctgacgacgatgatgatgaagatggagatttcatgttggacgacctagactttgatggtggaactggtttattggacattgtgactgaaggtgaggaggatgatgatgatgatagtCAAACACTTGGATCAGtgagtagtgatgatgattatgactatggttatTAA 5835 0.4189 MDDNQVNQNLVEPPREEEEEEEEDSSKMEEKELIAKVNKLMDKITSSPDNPKPTVLHALASILETQESRYMDENGHSSSTNARAAHNIGRLGSIIRENDDFFELISLKFLSENRYSTSVKAAASRLLLCCSLTWIYPHVFEEPVLENIKNWVTDDNTRLSGEEQNLKRDLGRKEVSDSELLKTYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRSRVLGETSGSQKDIGHLSENKHSSGSTSVRGRDDGRGRFRQLLESSHLDDTRMVEERSLDDQALERGQDRSVSGQACIDGEPADGLSEGADVCEVDSDGEERWHCRDIRDGRIKYGEHEDNARDDPSRRRANRGWGRSRAKGRVNEGVVESEPVLQSAGSGSRLGQGRNGRDRSSSRNADVKRGPDSKKTLISTISEALASEREDTDDCFQECRIGSKDISDLVRKAVLAAEAEARSANAPEEAVKAAGDAAADLVKTAASEEYKSTNDEEAAVLAASRAATTVIDAASAVEVSRSSSVCINTETEKVSHRETESSDDVQDCFIPDGQSLAQLRERYCIQCLALLGEYVEVLGPVLHEKGVDVCLGLLQQNSKHQEPSKVAFLLPDIMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSDVIYHVVELALQLLECNQDQARKNAALFFAAAFVFRAVLDAFDSQDGLQKLLGLLNDAASIRSGVTSGALGSSNSGSLRNDRTSSAEVLTSSEKQVAYHTCVALRQYFRAHLLLLIDSIRPNKSKFSAPRNISSIRAAYKPLDISNEAMDAVFLQLQKDRKLCLVFVTTKWQEVEKFLASNGHITMLELCQAPPVERYLHDLLQYALGVLQIVTLVPSSRKMIINATLSTNRAGIAVILDAANIASNHVDPEIIQPALNVLVNLVCPPPSLNKSQTSNGVLSEARDRNAERNNTIDQSAQVSSHIDPRERNGESSAVDRGSAAALTMKSVTSTPQASAPSATSGLVGDRRISLRSGTPQRSGVPQRSGESCTGLATQMETGYHQAREAVRNNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDNTIAHILTKLQVGKRLSELIRDSGSPSLGTEQGRWQAELSQAAIELIGIVANLGRASTLVASDATTTAIGRIERAAIAAATPITYPGSELLLLIHEHLLATGLGQTAASLLKEAQLTPLPPLLAPSSLAQQPTTQESSSTQIQWPSGRTPGGFLSSKLKLKPNAKNEDACLKSDVVFSAKKKSLTFSSSFGSHSKHQVSDSRQSSSVRKWFRTGKEASETNIVENPSESSVKHDTDAGSQYKTPNTLPSKRKLSDLKDIPMFSSSGKRLNVGDQGLRTPICSSAVRKSSLQSDGVGLSTPTCNLRNQQGRCTADNVDENQYSNLGQMTPSSQVLNDLQPNNPERVTLDSLVVQYLKHQHRQCPAPITTLPPISLMHPHVCPEPKRSLNAPSNVTARLGTREFKFTYGGVHGNRKDRQFVFSRFRPWRTYRDDAGALLTCITFVGDSSHIAVGSHTGELKFFDSNNNNVVESFTGHQSPLTLVQSYVSGETQLLLSSCSQDVKLWDATSILGGPTHSFEGCKAARFSNSGNVFAALSSESAGREILLYNIQTCQLETKLSDTFAPSTGRGHLYSLIHFSPADSMLLWNGVLWDRRDSRPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRQVASLDQTAITFNARGDVMYAILRRNLEDVMSAVNTRRVKHPLFAAFRTVDAINYSDIATTPVDRCVLDFATEPTDSFVGLITMDDQGEMYSSARSYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDEDPLLGPGFGGESDSDPDDLSNDDDEDSVSEPDDDDDEDGDFMLDDLDFDGGTGLLDIVTEGEEDDDDDSQTLGSVSSDDDYDYGY 1944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03023 1944 MobiDBLite consensus disorder prediction 226 314 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1313 1345 - -
Car05g03023 1944 Gene3D - 1518 1842 IPR015943 GO:0005515
Car05g03023 1944 MobiDBLite consensus disorder prediction 1219 1243 - -
Car05g03023 1944 SMART WD40_4 1517 1557 IPR001680 GO:0005515
Car05g03023 1944 SMART WD40_4 1605 1643 IPR001680 GO:0005515
Car05g03023 1944 SMART WD40_4 1560 1600 IPR001680 GO:0005515
Car05g03023 1944 MobiDBLite consensus disorder prediction 243 284 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1825 1944 - -
Car05g03023 1944 PANTHER BNAA03G51310D PROTEIN 22 1290 - -
Car05g03023 1944 PANTHER BNAA03G51310D PROTEIN 1278 1827 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1282 1306 - -
Car05g03023 1944 ProSiteProfiles LIS1 homology (LisH) motif profile. 1181 1213 IPR006594 GO:0005515
Car05g03023 1944 MobiDBLite consensus disorder prediction 1917 1932 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1874 1904 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1841 1863 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 334 407 - -
Car05g03023 1944 SUPERFAMILY WD40 repeat-like 1529 1752 IPR036322 GO:0005515
Car05g03023 1944 MobiDBLite consensus disorder prediction 1 30 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1019 1036 - -
Car05g03023 1944 SMART Lish 1181 1213 IPR006594 GO:0005515
Car05g03023 1944 MobiDBLite consensus disorder prediction 372 389 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 226 242 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1217 1243 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 390 404 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 937 1036 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 1282 1348 - -
Car05g03023 1944 PANTHER VPRBP PROTEIN-RELATED 22 1290 IPR033270 GO:0016567
Car05g03023 1944 PANTHER VPRBP PROTEIN-RELATED 1278 1827 IPR033270 GO:0016567
Car05g03023 1944 SUPERFAMILY ARM repeat 564 1122 IPR016024 -
Car05g03023 1944 MobiDBLite consensus disorder prediction 990 1007 - -
Car05g03023 1944 MobiDBLite consensus disorder prediction 334 349 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03023 K11789 - gmx:100800133 2706.01