Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03003 ATGGTTGTACAGTCTCTATGTCTCTCTCCTTCGAACAACCTTATCTTCAGGaacaacaacaacaacactacaaAGGTAATCCTTAACCAAACCAAATCCGAACACAGAAGGGACTTTTCTTCATCTTCTCAAACCACAATTTTCAGAAGGGATTTGGTACTCTTAGGCCTCACTTCTCTATCTCTAACATGCCCTCCATTTTCTGTTACTCTTGCTGAAGAAGAACCAAAAGTGGCTTCTTTTGTAGATGAAATCAATGCCTATTCTTATATCTACCCTGTTCAACTGCCCTCTAAAAAATTTGTCTTCAAATGGGTAGAGTCCCGAAAGCCAGAACGATACTCATCGGCTGCACCACTTTCTCCTAATGCACGGCTGCGTATTGTGTCTGAACGTGTTGATATCTTTGATAATCTCATCATTTCTGTCACGATAGGCCCTCCAAATTCAAGCCTTCTAAAAGAGAAGGATAAGAGCAAATGGACTGCAAAAAATGTTGCTGATTCAGTCTTAGCTGAAAAATCTTCACTGCGAGTTACTTCAAGTGAGCGCTCAGCTGAGAGTTCAGTTCTCGATGCACATTCTGATGAAATTGATGGTGAGCCTTACTGGTATTATGAATACCTTATTCGTAAATCGCCTAATACAATGTCTGAAGAATCGGGAATTTACCGGCATTATCTTGGTTCAACAGCAGAAAGAGATGGTTATTTGTACTCCATCAGTGCTTCAACCCTCAGCCCACAGTGGAAAAGTATGGGGCCTTTATTTGAAAAGACAGTGAGTTCATTCCGCCTTGTCAGTCCAACAGAAAATTATGTTCCCCCATTCAAAGATCCCTGGAGATTTTGGTGA 855 0.4023 MVVQSLCLSPSNNLIFRNNNNNTTKVILNQTKSEHRRDFSSSSQTTIFRRDLVLLGLTSLSLTCPPFSVTLAEEEPKVASFVDEINAYSYIYPVQLPSKKFVFKWVESRKPERYSSAAPLSPNARLRIVSERVDIFDNLIISVTIGPPNSSLLKEKDKSKWTAKNVADSVLAEKSSLRVTSSERSAESSVLDAHSDEIDGEPYWYYEYLIRKSPNTMSEESGIYRHYLGSTAERDGYLYSISASTLSPQWKSMGPLFEKTVSSFRLVSPTENYVPPFKDPWRFW 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03003 284 SUPERFAMILY Mog1p/PsbP-like 80 266 IPR016123 -
Car05g03003 284 Pfam PsbP 80 265 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Car05g03003 284 PANTHER - 32 284 - -
Car05g03003 284 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC 32 284 - -
Car05g03003 284 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 67 266 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03003 - - lja:Lj1g3v1931390.1 396.741