Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02969 ATGGAAGCTACTGCCGGCATGGTTGCTGGGTCCCACAAAAGGAACGAGCTTGTTCGAATTCGACACGATTCTTCCGACAGTGGGCCGAAACCTTTGAAGAATTTGAATGGACAAATCTGTCAAATATGTAATGATAATGTTGGATTAACAGCCACTAGTGACGTGTTTGTTGCTTGCAATGAGTGTGGTTTCCCAGTTTGTCGTCCTTGTTATGAATATGAACGAAAAGATGGGAACAAATCTTGTCCTCAGTGCAAGACAAGATACAAAAGGCACAGAGGGAGTCCTCGAGTTGAGGGAgatgatgaagaggacgatgttgatgatATCGAGAATGAGTTCAATTATGCACAAGGAAATTCAAAAGCAAGGAGGCAGTGGGAAGATGAACTCTCTTCGTCTTCTAGACGCGATTATCAGCAACCAATTCCTCTTCTCACCAATGGCCAAACTATGTCTGGTGAGATCCCGTGCGCTACGCCCGATACTCAATCTGTACGAACTACTTCTGGTCCTTTGGGCCCATCTGAGAAAGTTCACTCACTGCCCTATATCGATCCAAGGCAACCAGTTCCGGTGAGAATTGTGGATCCATCAAAGGACTTAAATTCTTATGGTTTGGGAAATGTTGACTGGAAGGAAAGGGTTGAAGGTTGGAAGCTGAAGCACGAGAAAAATATGGTACAAATGACTGGTAGATACTCTGAGGGAAAAGGAGGAGGAGACATTGAAGGGACTGGATCTAATGGAGAAGAACTTCAAATGGTTGATGATGCTCGACAACCTTTGAGTCGGATCGTACCTATTTCTTCATCTCAGCTTACTCCTTATCGTGTCGTTATAGTACTCCGGCTGATTATTCTCGGCTTCTTCTTACAATATCGTGTAACTCACCCCGTAAAAGATGCATACCCACTGTGGTTGACATCAGTTATCTGTGAGATTTGGTTTGCCTTATCCTGGATTTTGGATCAGTTTCCCAAATGGTCTCCCATTAATCGCGAGACTTATCTTGACAGGCTTGCTATAAGATATGATCGTGACGGAGAACCATCACAGTTGGCCCCTGTTGACGTTTTTGTTAGTACAGTGGACCCTCTTAAAGAGCCGCCTCTTGTAACTGCAAATACTGTTTTGTCTATACTTGCTGTTGATTACCCTGTCGACAAGGTTTCCTGCTATGTATCAGACGATGGTTCGGCAATGTTGACTTTTGAAGCCTTATCAGAAACGGCCGAGTTTGCAAAGAAGTGGGTGCCCTTTTGCAAAAAGCACAATATTGAGCCAAGAGCCCCTGAATTTTATTTTGCTCAGAAGATTGATTACTTAAAGGACAAGATTCAACCCTCTTTTGTTAAGGAGCGACGGTCAATGAAGAGAGCATATGAAGAATTCAAAGTTCAGATCAATGCCCATGTGGCCAAAGCTCAGAAGACGCCAGAGGAAGGTTGGACAATGGAGGATGGAACTCCTTGGCCTGGAAATAATCCCAGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGGCTTGATACAGATGGAAATGAGCTGCCTAGGCTTGTTTATGTTTCTCGTGAAAAGCGACCAGGCTTCCAACATCACAAGAAGGCTGGAGCTATGAATGCTTTGATTCGAGTTTCTGCTGTCTTGACCAATGGTGCATATATTTTGAATGTCGATTGTGATCACTATTTCAATAATAGTAAAGCTCTTAAAGAAGCAATGTGTTTCATGATGGATCCCGCTTATGGAAAGAAGACATGCTACGTGCAATTTCCTCAGAGATTTGATGGCATTGATTTGCACGATCGATACGCCAATCGCAATATTGTTTTCTTCGATatcaatatgaaaggtCACGATGGTATTCAGGGCCCAGTCTATGTGGGAACAGGTTGCTGTTTCAATAGGCAGGCTTTGTATGGTTATGATCCTGTTTTGACTGAGGAAGATCTTGAACCTAACATTATTGTGAAGAGTTGTTGGGGTTCTAGAAAGAAAGGAAGGGGTGGCAATAAGAAGTACAATGACAAGAAGAGGGGAGTTAAAAGAACTGAATCCACCATTCCCATATTTAATATGGAGGATATAGAGGAGGGTGTTGAAGGTTATGATGATGAAAGGTCACTTCTAATGTCTCAGAAGAGCTTGGAGAAGCGATTTGGACAGTCTCCAGTTTTTATTGCTGCCACCTTCATGGAGCAGGGTGGCATTCCACCTTCAACCAATCCTGCAACTCTTCTTAAGGAAGCAATCCACGTTATCAGCTGCGGTTATGAAGACAAGACAGAATGGGGAAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATCTTGACTGGGTTTAAGATGCATGCCCGTGGTTGGATTTCCGTCTATTGCATGCCACCTCGTCCAGCATTTAAGGGTTCTGCACCTATCAATCTTTCTGATCGTCTCAATCAAGTGCTTCGGTGGGCCTTGGGTTCAATTGAGATCTTCCTTAGCAGACATTGTCCCTTGTGGTATGGCTACAATGGGAGGATGAAGAGTCTCATGAGGCTGGCGTATATCAATACAATTGTCTACCCCTTTACCTCACTCCCATTGATTGCGTACTGTACGCTTCCCGCATTTTGTCTCATCACAAATAAATTTATTATTCCTGAGATAAGCAACTTTGCAAGCATGTGGTTTATCCTTCTCTTCATTTCCATTTTCACTACTTCGATTCTTGAGCTTAGGTGGAGTGGTGTCGGTATAGAAGACTGGTGGAGGAATGAACAGTTTTGGGTTATCGGTGGAACGTCCGCACATCTCTTCGCCGTGTTCCAAGGTCTTCTTAAAGTCCTTGCAGGTATAGACACAAATTTTACCGTCACATCAAAGGCGTCAGATGAAGACGGAGACTTCGCCGAGCTTTACGTGTTCAAATGGACATCACTTCTCATCCCTCCTACAACCGTGCTTATCGTGAATTTGATAGGTATCGTGGCTGGTGTTTCTTACGCCATAAACAGCGGTTACCAATCATGGGGTCCACTGTTTGGAAAGCTCTTCTTTGCTATATGGGTCATTGCTCATTTATACCCTTTCTTGAAGGGTCTTTTGGGGAGACAAAACCGGACTCCAACCATTGTTATTGTTTGGTCTATTCTCCTTGCTTCTATATTCTCCTTGTTGTGGGTGAGAATTGACCCTTTCATCACTGACACCAGCAAATCAACTGGTCAATGTGGTATCAACTGTTAG 3249 0.4309 MEATAGMVAGSHKRNELVRIRHDSSDSGPKPLKNLNGQICQICNDNVGLTATSDVFVACNECGFPVCRPCYEYERKDGNKSCPQCKTRYKRHRGSPRVEGDDEEDDVDDIENEFNYAQGNSKARRQWEDELSSSSRRDYQQPIPLLTNGQTMSGEIPCATPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKHEKNMVQMTGRYSEGKGGGDIEGTGSNGEELQMVDDARQPLSRIVPISSSQLTPYRVVIVLRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFALSWILDQFPKWSPINRETYLDRLAIRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRSMKRAYEEFKVQINAHVAKAQKTPEEGWTMEDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYILNVDCDHYFNNSKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGHDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGGNKKYNDKKRGVKRTESTIPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRMKSLMRLAYINTIVYPFTSLPLIAYCTLPAFCLITNKFIIPEISNFASMWFILLFISIFTTSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFITDTSKSTGQCGINC 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02969 1082 MobiDBLite consensus disorder prediction 1 30 - -
Car05g02969 1082 MobiDBLite consensus disorder prediction 116 137 - -
Car05g02969 1082 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 21 1082 - -
Car05g02969 1082 ProSiteProfiles Zinc finger RING-type profile. 40 86 IPR001841 -
Car05g02969 1082 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 657 IPR029044 -
Car05g02969 1082 PANTHER CELLULOSE SYNTHASE 21 1082 - -
Car05g02969 1082 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 113 IPR013083 -
Car05g02969 1082 CDD mRING-HC-C4C4_CesA_plant 38 88 - -
Car05g02969 1082 MobiDBLite consensus disorder prediction 162 185 - -
Car05g02969 1082 SUPERFAMILY RING/U-box 25 112 - -
Car05g02969 1082 Pfam Cellulose synthase 357 1073 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car05g02969 1082 Pfam Zinc-binding RING-finger 30 107 IPR027934 -
Car05g02969 1082 MobiDBLite consensus disorder prediction 14 28 - -
Car05g02969 1082 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 515 657 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02969 Car-Chr5 74628483 74635529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02969 1 1068 Glycosyltransferase AT4G32410 87.184 0.0 1902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02969 K10999 - gmx:100798193 2092.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02969 05 74628483 74635529 Car05g02969 05 74628483 74635529 ECH