Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02967 ATGAGGCTATTTACCCTTCTAATACTTTCTATCATATTACTCAATCAATTGAGCCTTATTCTTGCAGACCTTGGTACTGCTTCTTCTTATGGGCCTCCATATATACCAACTGCTTGTGACGGAAATAGGAGAGAGCAGTTTCCTCCAGGAAATATATTTGCAGCAGTGAATGAAGGGTTATGGGATAATGGTGCTGCATGTGGAAGGAGATACAGAATAAGGTGTCTGAGTGGAATCAATAAGCCATGCAAAGATGGTAGCATTGATGTTAAAATTGTTGATATTATTTCATGTTCAAAGCACCCTTGCTTCCAAACTTTCCTCTTGTCAACTCAAGCCTTTGCAGCCATCTCACGCTTCCCTAATGCAAATATCAATATTGAATATATGCAGATATGA 399 0.3885 MRLFTLLILSIILLNQLSLILADLGTASSYGPPYIPTACDGNRREQFPPGNIFAAVNEGLWDNGAACGRRYRIRCLSGINKPCKDGSIDVKIVDIISCSKHPCFQTFLLSTQAFAAISRFPNANINIEYMQI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02967 132 SUPERFAMILY Barwin-like endoglucanases 12 131 IPR036908 -
Car05g02967 132 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 132 IPR007112 -
Car05g02967 132 Pfam Lytic transglycolase 54 129 IPR009009 -
Car05g02967 132 Gene3D - 23 132 IPR036908 -
Car05g02967 132 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 131 - -
Car05g02967 132 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 131 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02967 - - mtr:MTR_3g107500 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02967 05 74618972 74621775 Car05g02967 05 74618972 74621775 ECH