Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02957 ATGTTCCACCTTGGCTCTGTCAGATTCTCGCTTGCATGGGATCCAATGTCACCGGTCTCAAAGGAACGCATAGAACTTGTTGCTTTGTATAAGAGCAGAGGTTGTCTTGGATGTTTTTCAAAACCTCTTGTAATTATTTCAATGGGCGAGGCCGATGCATCTAAGGGACTAAGCACTCAAGCCCAAAATATGAACAAAGACAACAGATCAGAAGATTTTTGGAGCAGCAGTGCTATTGAATTGGATCATGGTGCAAATCAGTCTCAGAGGAGTGTCTCATCGATTGCCATGTCAAACCATCCTTCTTCTGATCCTCAAAGTAGTGAAGGCATTCAGACTGATCCTCCAGAATTTGTTAATCATGGTCTTCTTCTCTGGAACCAAACAAGGCAACAGTGGGTTGGAAATAGAAGGTCTGAGCGTCAGACACAAGCCGGAGAACCCAAAATAAGTTGGAACGCCACCTACGAGAGCCTACTCGGGACCAGCAAGCCTTTTCCTCAGCACATTCCTCTTGGAGAAATGGTTGATTTTCTTGTTGATATATGGGAACTAGAGGGCATGTATGATTGA 573 0.4433 MFHLGSVRFSLAWDPMSPVSKERIELVALYKSRGCLGCFSKPLVIISMGEADASKGLSTQAQNMNKDNRSEDFWSSSAIELDHGANQSQRSVSSIAMSNHPSSDPQSSEGIQTDPPEFVNHGLLLWNQTRQQWVGNRRSERQTQAGEPKISWNATYESLLGTSKPFPQHIPLGEMVDFLVDIWELEGMYD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02957 190 MobiDBLite consensus disorder prediction 89 114 - -
Car05g02957 190 PANTHER OS07G0479600 PROTEIN 30 190 - -
Car05g02957 190 Pfam Protein of unknown function (DUF4050) 80 145 IPR025124 -
Car05g02957 190 Pfam Protein of unknown function (DUF4050) 149 190 IPR025124 -
Car05g02957 190 PANTHER DUF4050 FAMILY PROTEIN 30 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02957 Car-Chr5 74523776 74527030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02957 - - gmx:100793281 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02957 05 74523776 74527030 Car05g02957 05 74523776 74527030 ECH
Car05g02957 05 74523776 74527030 Car04g03183 04 60147386 60150285 ECH
Car07g00754 07 6707764 6713479 Car05g02957 05 74523776 74527030 ECH