Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02948 ATGTCTCTGAAAGCATCTTATTCATCGGAGAATCTGATTCTTCCGGTATCCGATCCTCCAAACGATGAAGACCGAGAGAGGCTTTTGAAGAGCGATGATACGATCCTCAGAGGTTCTTCCATGACTAAACGTGGAGCATTCGCTGCTATCTCTTACATGTCTTGCGCTGTGCTCTTGGTGATGTTCAATAAGGCGGCTCTTTCATCTTATGACTTTCCATCTGCAAATTTCATCGCTCTTCTTCAGATGGTATGTTCGTGTTGTTTTCTATATGTATTGAGGTCATGGAGGATAATTTCTTTCACAACAGGTGAAGCAGTAATTATAGCTGATAACTCAAAAATATTTGTGTCATTCAAGACTTTGAGGCACACTCTTCCTATAGCTGGATCATATTTACTTTATATGCTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCAATGTATACCACCCTTAGGAGGACCACAGTAGTATTTACAATGATTGTGGAGTATATGCTGGTGGGGCAACGGTATACACCTTCTATAATTTTCAGTGTTGGCTTGATTGTCTTCGGTGCATTTGTTGCTGGAGCGCGGGACTTATCTTTTGATGCCTACGGTTATGCCGTTGTTTTCCTGTCAAACATTACAACAGCTATATATCTTGCAACGATATCTCGTGTTGGAAAAACTAGTGGCCTTAATAGCTTTGGGCTTATGTGGTGCAATGGTATCATATGCGGGCCAATTTTGTTTGTTTGGACATTTGTTCGGGGTGACTTGAAGATGACTATTAATTTTCCTCATCTGCTTTCGCTTGGTTTTATTGTTGTTTTGCTTCTATCCTGCATCCTAGCTTTCTTCCTGAATTACAGTATTTTCCTGAACACAACTCTGAATTCAGCTCTGACACAGACAATTTGTGGTAACTTGAAGGATCTATTTACTATTGGCTTTGGCTGGATTATTTTTGGTGGGCTACCATTTGATTTTTGGAATGTAATTGGACAGTTTCTCGGTTTTACGGGTTCTGGTTTATATGCCTACTATAAGCTAATTGGCATCTAA 1056 0.4015 MSLKASYSSENLILPVSDPPNDEDRERLLKSDDTILRGSSMTKRGAFAAISYMSCAVLLVMFNKAALSSYDFPSANFIALLQMVCSCCFLYVLRSWRIISFTTGEAVIIADNSKIFVSFKTLRHTLPIAGSYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMIVEYMLVGQRYTPSIIFSVGLIVFGAFVAGARDLSFDAYGYAVVFLSNITTAIYLATISRVGKTSGLNSFGLMWCNGIICGPILFVWTFVRGDLKMTINFPHLLSLGFIVVLLLSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIGFGWIIFGGLPFDFWNVIGQFLGFTGSGLYAYYKLIGI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02948 351 PANTHER BNAA08G30680D PROTEIN 14 350 - -
Car05g02948 351 Pfam Triose-phosphate Transporter family 55 343 IPR004853 -
Car05g02948 351 PANTHER SOLUTE CARRIER FAMILY 35 14 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02948 Car-Chr5 74452781 74457166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02948 22 288 Organic Solute Cotransporters AT2G13650 24.101 1.35e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02948 K15281 - gmx:100778544 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02948 05 74452781 74457166 Car05g02948 05 74452781 74457166 ECH
Car04g03187 04 60205594 60210058 Car05g02948 05 74452781 74457166 PCT