Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02941 ATGAAGCACACTTCATCCGAAGCAGTTCCTTCTCTATCATCCGTACCTTCATTCACGGACCAatcacaatccgccacgtcatcatcagcatcagcatcatcttcttcatcttccgcCGCAGCGGCGGATGACCTTGTAATAACCTCTCGCGACGGAGGCGGTGCTCAGGAGACGGTGGTTTTGGATCGGAGAGGCGAATACTCCGTTGTATGTCGTTGGACGGTTAACAATTTACCGAAGGTAAAAGCTAGAACACTGTCTAGTAAGTACTTTGAGGTAGGTGGTTACGATTGTCGCTTATTGATATACCCTAAAGGTGATACACAAGCTCTTCCTGGTTATGTATCTGTTTATCTTCAAATCATGGACCCTAGAGGACCTTCCTCTACGAAATGGAACTGTTTCGCTAGTTATCGTTTGGTAATTGTTAATTTTGCTGATGAATCAAAGAGCATTCATCGTGATTCTTGGCATAGGTTTTGTACTAAGAAGAAATCACACGGTTGGTGTGATTTCATACCTTCTTCCACTCTTTTTGATCCAAAATTAGGTTATATGTTTAACAATGATTCTATATTGATTACTGCTGATATTCTTATTCTTAATGAGTCTGTAAATTTCACTCGTGATAACAATGAGGTTCAGTCGTCATCGTTTTCGTCGTCATCGTTAACGTCTTCCTCGGTTGTTGCTGGTCCTGTTTCTGATGTTTTGAGTGGGAAGTTCACGTGGAAAGTGCATAATTTTAGTTTGTTTAGGGAGATGATTAAGACTCAGAAGATAATGAGTCCTGTTTTCCCGGCTGGGGAGTGTAATTTGAGGATTAGTGTTTACCAGAGTTCGGTGAATGGTGTTGAACATCTTTCAATGTGTTTGGAAAGTAAGGATACGGATAAGACTGTGGTGTTGTCTGATAGGAGTTGTTGGTGTTTGTTTAGAATGTCTGTTTTGAATCAGAAGCCTGGTTCTAATCACATGCATAGGGATTCTTATGGTCGTTTTGCTGCTGATAACAAGAGTGGTGACAATACTAGCTTGGGTTGGAATGATTATATGAAGATGCCGGATTTCATTGGGACGGATTCGGGGTTTCTGGTGGATGACACTGCAGTTTTTAGTACCTCGTTTCATGTGATAAAGGAGTTCAGCAGCTTCTCCAAGAATGGGACTATCATTGGTGGGAGAAGTGGAGGCGGTGCGAGGAAGTCTGATGGCCACATTGGAAAGTTCACTTGGAGGATTGAGAATTTTACTAGGTTGAAGGATTTACTAAAGAAGAGGAAAATTACGGGTCTTTGCATTAAGAGTAGGAGGTTTCAAATTGGCAATAGGGATTGTCGTCTTATTGTTTATCCCCGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACGGATTCAAGAAATACTTCAAGTGATTGGAGTTGTTTTGTTAGTCATCGGCTGTCAGTTGTAAACCAGAGAATGGAGGACAAATCTGTCACCAAGGAATCTCAAAACCGCTACTCTAAAGCTGCAAAGGATTGGGGCTGGCGTGAGTTTGTGACACTTACAAGTCTATTTGATCAAGATTCAGGCTTTCTTGTCCAGGATACTGTCATATTCTCAGCTGAAGTTCTTATATTGAAAGAGACATCAATAAAACAGGATTTTACTGAGCATGATTCTGAGTTAAGCAGCAGTGGTTCCCTTGATAGTAATGGAAAAAGAAGTTCATTTACATGGAAAGTGGAGAATTTCCTTTCTTTTAAGGAAATAATGGAGACTCGGAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGAATTGGTGTGTATGAGTCATTTGATACCATATGTATTTATTTGGAGAGTGACCAGGCTGTTGGTAGTGACCCTGATAAAAACTTCTGGGTCAGATACAGAATGGCTGTTGTGAATCAAAAAAACCCAGCTAAGACTGTATGGAAAGAATCTTCTATCTGCACAAAAACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGCAGATGCAGGGTTTCTTGTTCGTGACACCGTTGTTTTTGTGTGTGAAATATTGGATTGCTGTCCTTGGTTTGACTTTTCAGACTTAGAAGTTTTTGCTTCGGAGGATGATCAGGATGCACTGACAACTGATCCCGATGAACTGATCGACTCTGAAGATAGTGAAGGGATAAGTGGAGATGAGGAAGATATTTTTAGAAATCTTCTTTCCAGAGCTGGATTTCATTTAACTTATGGAGATAATCATTCACAGCCACAGGTTACTTTAAGGGAGAAACTTTTAATGGATGCTGGTGCAATTGCTGGGTTTTTGACTGGACTTCGGGTTTATCTTGACGATCCTGCAAAAGTAAAGCGTTTGCTTCTACCTACGAAACTCTCTGGTAGTTGTGATGGGAAGAAGGCCACCAAGGCTGATGAGTCATCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTCTTACAGCAAGCAATCATTGATTTACTATTGGATATAATGGTTGAGTGCTGCCAGCCTACTGAAGTGGGTCCTGTTCCTGATTCTGTTGATGCATGCTCTAATCCTTCTCCAGACAGCAGTGGAACTGTTAGTCCTCTTGAATGTGATAATGAAAATAGAGCAGTGGAGTCTGCACAAGTTCTTGTTCGTGAGAGATTGGATTCTGTTGTTGAAGAAAGCAGTAGTACATCTTCTATACAGACCTCTGATTTAAATGGGAATGGTATTCAGGAAAAAGCTCTTCCTGGACAGTCTACTTGTCCACCAGAAACATCTGCCACTGTTTCAGAAAATGCGTCATTTCGGTCAAAGACTAAGTGGCCAGAGCAGTCTGAGGAACTCTTAGGTTTGATTGTAAACTCACTAAGAGCTTTGGATGGGGCTGTTCCACAAGGTTGTCCGGAACCTAGACGGCGACCTCAGTCTGCACAGAAAATTGCACTTGTATTGGACAAGGCTCCTAAGCATTTGCAAGAAGACCTTGTTGCTTTGGTACCCAAATTGGTTGAGCAGTCGGAGCACCCACTGGCTGCACATGCACTTCTTGAGCGCCTTCAACAGCCAGATGCGGAACCTACTTTACGAATACCTGTTTTTGGGGCTCTTAGTCAATTGGAGTGTGGTAGTGAAGTGTGGGAGCGCATTCTGTTTCAGTCATTTGAGCTTTTGACGGATTCAAACGACGAACCCCTGGTTGCAACAATAGATTTTATATTCAAAGCGGCATCTCAATGTCAACACCTTCCTGAAGCAGTTAGGTCTGTTCGTGTCAGGCTGAAAAGTCTAGGTCTTGATGTGTCGCCTTTTGTCCTTGACTTTTTGAGCAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACCATACTGAGGGATATTGATTGTGATGAGGATTATGGTGAAAGTTGCTCATCTCTTCCGTGTGGGATTTTCTTATTTGGTGAACATGGCACTGCTGCTACTGGACTGCACATGATTGATGAGGAGGCTTTCCGTGCTAGTCGTCATTTTTCAGATATTTATATATTGTTAGAGATGTTATCTATTCCTTGTCTCGCTGTTGAAGCTTCTCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATAGGTGCTCAGTCTGTAGCCCTGGTATTGGAAAGCCGTCTTTCCCAAAGGTTGAACAATAATACTAGATATGTTTCTGAAAATTTTCAACATTCAGATGGTGCAAGTGCAACAGAGGAAGATGCCTGTGAGCAATTGGGAGTTCAAAGGGATGATTTTACTTCAGTTCTTGGTCTTGCTGAAACTTTGGCCCTCTCCAGAGACCTATGTGTGAAAGAGTTTGTGAAATTGCTCTACATGATAATCTTTAGATGGTATGCTAATGAATCTTATCGGGGGAGGATGCTGAAGAGGCTTGTTGACCGCGCCACCAGCACTACTGATAATGGCCGCGGAGAAGATTTTGATTTGGATATCTTGGTTACTTTGGTCTGTGAGGAACAGGAGTTTGTTAGGCCTGTTTTGAGTATGATGCGAGAAGTTGCTGAGCTTGCGAATGTTGATCGGGCTGCTCTGTGGCACCAGTTATGTGCTAGTGAAGATGAAATTATTCGCGTACGTGAAGAAAGCAAAACTGAGATTTCTAATATCGCTAAGGAAAAATCTATTCTATCACAAAAGCTGAGTGAATCCGAGGCCACAAACAATCGTCTCAAGTCTGAAATGAAATCCGAGGTAGATCGGTTTTCTAGGGAAAAGAAGGAACGAGCAGAACAAATTCAAGAGGTTGAGAGTCAGCTCGAATGGCTTCGCTCAGAGCGGGATGATGAAATATTAAAGCTCTCTGCAGAGAAGAAAGTTCTTCATGATCGTTTGCATGACACAGAGACACAACTTTCTCAGTTGAAGTCTCGGAAGCGTGATGAACTAAAGAAAGTAGTCAAGGAGAAAAATGCCCTTGCTGAAAGATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGATGAAGAATTGAAAAGATATGCAACAGAAAACGTGAGTCGGGAAGAAATCCGGCAATCACTTGAGGATGAAGTTCGTAGATTGACTCAAACAGTTGGACAAACCGAGGGAGAAAAGCGGGAAAAGGAGGAGCAGGTTGCTAGGTGCGAAGCATTTATTGATGGCATGGAATCAAAGTTGCAGGCCTGCCAGCAATATATCCACACCCTTGAGGCCTCACTCCAGGAGGAAATGTCACGACATGCCCCACTATATGGTGCTGGTCTGGAGGCTCTATCAATGAAAGAGTTGGAAACACTATCACGTATTCACGAAGAGGGCCTGAGGCAGATCCATGCCCTTCAACAACGTAAAGGGAGTCCAGCTGGGAGCCCTCTCTTGAGTCCCCATGCTCACCCTCACAGCCATGGATTATATGCTTCTGCGTCACCTCCAATGGCTGTGGGACTTCCTCCCTCAATCATCCCTAATGGCGTAGGGATCCATAGCAACGGGCATGTGAATGGTGCAGTGTTTTTTATGGTAAATGGTGGGTGCACTGGTATATATGACCCTAATTTACATGTCACTATTGGTTTTAAAGTTACATAA 5118 0.4218 MKHTSSEAVPSLSSVPSFTDQSQSATSSSASASSSSSSAAAADDLVITSRDGGGAQETVVLDRRGEYSVVCRWTVNNLPKVKARTLSSKYFEVGGYDCRLLIYPKGDTQALPGYVSVYLQIMDPRGPSSTKWNCFASYRLVIVNFADESKSIHRDSWHRFCTKKKSHGWCDFIPSSTLFDPKLGYMFNNDSILITADILILNESVNFTRDNNEVQSSSFSSSSLTSSSVVAGPVSDVLSGKFTWKVHNFSLFREMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEHLSMCLESKDTDKTVVLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMPDFIGTDSGFLVDDTAVFSTSFHVIKEFSSFSKNGTIIGGRSGGGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQRMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIKQDFTEHDSELSSSGSLDSNGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFDFSDLEVFASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNHSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSCDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPTEVGPVPDSVDACSNPSPDSSGTVSPLECDNENRAVESAQVLVRERLDSVVEESSSTSSIQTSDLNGNGIQEKALPGQSTCPPETSATVSENASFRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQEDLVALVPKLVEQSEHPLAAHALLERLQQPDAEPTLRIPVFGALSQLECGSEVWERILFQSFELLTDSNDEPLVATIDFIFKAASQCQHLPEAVRSVRVRLKSLGLDVSPFVLDFLSKTINSWGDVAETILRDIDCDEDYGESCSSLPCGIFLFGEHGTAATGLHMIDEEAFRASRHFSDIYILLEMLSIPCLAVEASQTFERAVARGAIGAQSVALVLESRLSQRLNNNTRYVSENFQHSDGASATEEDACEQLGVQRDDFTSVLGLAETLALSRDLCVKEFVKLLYMIIFRWYANESYRGRMLKRLVDRATSTTDNGRGEDFDLDILVTLVCEEQEFVRPVLSMMREVAELANVDRAALWHQLCASEDEIIRVREESKTEISNIAKEKSILSQKLSESEATNNRLKSEMKSEVDRFSREKKERAEQIQEVESQLEWLRSERDDEILKLSAEKKVLHDRLHDTETQLSQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDEELKRYATENVSREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAFIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHALQQRKGSPAGSPLLSPHAHPHSHGLYASASPPMAVGLPPSIIPNGVGIHSNGHVNGAVFFMVNGGCTGIYDPNLHVTIGFKVT 1705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02941 1705 ProSiteProfiles MATH/TRAF domain profile. 239 376 IPR002083 GO:0005515
Car05g02941 1705 SUPERFAMILY TRAF domain-like 237 382 - -
Car05g02941 1705 Pfam MATH domain 439 545 IPR002083 GO:0005515
Car05g02941 1705 Pfam MATH domain 587 694 IPR002083 GO:0005515
Car05g02941 1705 Pfam MATH domain 81 200 IPR002083 GO:0005515
Car05g02941 1705 SMART math_3 579 679 IPR002083 GO:0005515
Car05g02941 1705 SMART math_3 412 524 IPR002083 GO:0005515
Car05g02941 1705 SMART math_3 244 357 IPR002083 GO:0005515
Car05g02941 1705 SMART math_3 70 178 IPR002083 GO:0005515
Car05g02941 1705 MobiDBLite consensus disorder prediction 906 953 - -
Car05g02941 1705 MobiDBLite consensus disorder prediction 1 37 - -
Car05g02941 1705 ProSiteProfiles MATH/TRAF domain profile. 68 198 IPR002083 GO:0005515
Car05g02941 1705 Coils Coil 1527 1554 - -
Car05g02941 1705 Coils Coil 1396 1448 - -
Car05g02941 1705 MobiDBLite consensus disorder prediction 1623 1649 - -
Car05g02941 1705 ProSiteProfiles MATH/TRAF domain profile. 407 543 IPR002083 GO:0005515
Car05g02941 1705 CDD MATH 408 543 IPR002083 GO:0005515
Car05g02941 1705 PANTHER TRAF-LIKE FAMILY PROTEIN 34 1680 - -
Car05g02941 1705 MobiDBLite consensus disorder prediction 867 882 - -
Car05g02941 1705 MobiDBLite consensus disorder prediction 904 954 - -
Car05g02941 1705 Coils Coil 1460 1519 - -
Car05g02941 1705 SUPERFAMILY TRAF domain-like 67 206 - -
Car05g02941 1705 CDD MATH 240 372 IPR002083 GO:0005515
Car05g02941 1705 ProSiteProfiles MATH/TRAF domain profile. 574 698 IPR002083 GO:0005515
Car05g02941 1705 SUPERFAMILY TRAF domain-like 408 549 - -
Car05g02941 1705 MobiDBLite consensus disorder prediction 863 884 - -
Car05g02941 1705 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 400 552 IPR008974 GO:0005515
Car05g02941 1705 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 563 700 IPR008974 GO:0005515
Car05g02941 1705 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 235 382 IPR008974 GO:0005515
Car05g02941 1705 PANTHER TRAF-LIKE FAMILY PROTEIN 34 1680 - -
Car05g02941 1705 CDD MATH 576 698 IPR002083 GO:0005515
Car05g02941 1705 CDD MATH 72 198 IPR002083 GO:0005515
Car05g02941 1705 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 67 216 IPR008974 GO:0005515
Car05g02941 1705 SUPERFAMILY TRAF domain-like 575 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02941 Car-Chr5 74377542 74387817 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02941 - - ccaj:109798115 2955.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02941 05 74377542 74387817 Car05g02941 05 74377542 74387817 ECH