Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02940 ATGAAGATTTGCCATAGACACTTGCTTTTTGCCACTACGTTACTATCTCTAGCGTTATTCACCGTCGTCTATATGATGCTTCCTTCGAATTTGACGAAATTCATTATCGACACAAAGCCTTCATATTCCGTTTCACTTCATCACTTACGAACAAAGGTTTCCGGCGAGAACGATCACCTCCTTGCCGTTCGACACACCAGTCACTCAAATGCCACCGTAACGAGGGAAGTAAGAAAGGTGAAGAGCAAAGAAGAAAAGAGAGAAGAAGGACTGGCACGAGCGAGAGGTTCAATACGGAAGGCAGCATTAGGAGATGATAGAAGCAATCTCAGTCTGTCAAAATCACCACACAACAACGACGGTTACATTCCCGCTGGAGCCGTTTATCATAACCCGCGCTTATTTTATCAGAGCTACTTGGAGATGGAGAAGATATTCAAAGTGTACGTATACCCAGATGGGGACCTACCAATTGTTCACGATGGCCCTTGCAAGGACATATACTCGATTGAAGGGAGGTTCCTCCATGAGATGGAACACGGAGTTGGAAGGTTTAGAACCAATGATCCTAATGCTGCTCATGTTTACTTTTTACCATTCAGTGTCACATGGATGGTCAAATACCTCTATACACCATCCTCTAATTACGACATCACTCCTTTAAAGCAGTTTGTCTCTGATTACGTGAGAATGGTATCTATGAGGTACCCCTTCTGGAACAAAACTCGTGGTGCCGACCACTTCATGCTTGCTTGCCATGATTGGGGTCCACATGCATCAAAGGGTAATCCTTTCCTTTACAACACCTCCATCCGTGTCTTGTGCAATGCCAACACTTCTGAAGGTTTCAATCCTCTAAAAGATGTAACTTTACCAGAAATTCACTTATATGGAGGTGAAGTATCCCCTAAACTCCTTTCACTTCCTCCGGAAAATGCCCCACGCCGCTACCTCGCCTTTTTCGCCGGTGGTATGCACGGCCCAATTCGCCCCATTCTTCTCCACCATTGGAAAAACAGAGACAGTGACATTAATGTGTACGAGTATCTCCCTAAAGGCCTAGATTACTATTCCTTAATGCTAAACTCCAAGTTCTGTCTTTGTCCAAGTGGCCATGAAGTGGCTAGCCCAAGAATTGTGGAGTCAATTTATGCAGAATGTGTACCTGTGATTCTATCGAATTATTATGTGTTGCCTTTCAGTGATGTGCTGCGATGGGAAGCATTTTCAGTACAGGTGGATGTTTCGAATATTCCTAGGTTGAAAGAGGTTCTTAATGCTATTCCAGAGAGCAAGTACAGGAAGCTCAAACAAGGTGTAAGGGCTGTGAGGAGACATTTTACTCTTAATCAGCCGGCTAAAAGATTTGATGTTTTTCACATGATCTTACACTCAATATGGCTGAGGAGATTGAATATGAAACTCGTATAG 1431 0.4361 MKICHRHLLFATTLLSLALFTVVYMMLPSNLTKFIIDTKPSYSVSLHHLRTKVSGENDHLLAVRHTSHSNATVTREVRKVKSKEEKREEGLARARGSIRKAALGDDRSNLSLSKSPHNNDGYIPAGAVYHNPRLFYQSYLEMEKIFKVYVYPDGDLPIVHDGPCKDIYSIEGRFLHEMEHGVGRFRTNDPNAAHVYFLPFSVTWMVKYLYTPSSNYDITPLKQFVSDYVRMVSMRYPFWNKTRGADHFMLACHDWGPHASKGNPFLYNTSIRVLCNANTSEGFNPLKDVTLPEIHLYGGEVSPKLLSLPPENAPRRYLAFFAGGMHGPIRPILLHHWKNRDSDINVYEYLPKGLDYYSLMLNSKFCLCPSGHEVASPRIVESIYAECVPVILSNYYVLPFSDVLRWEAFSVQVDVSNIPRLKEVLNAIPESKYRKLKQGVRAVRRHFTLNQPAKRFDVFHMILHSIWLRRLNMKLV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02940 476 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 59 474 - -
Car05g02940 476 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 59 474 IPR004263 GO:0006486|GO:0016757
Car05g02940 476 Pfam Exostosin family 144 428 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02940 Car-Chr5 74370011 74376586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02940 - - gmx:100820065 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02940 05 74370011 74376586 Car05g02940 05 74370011 74376586 ECH
Car04g03192 04 60273291 60278248 Car05g02940 05 74370011 74376586 PCT