Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02935 ATGGTAACTCTTAATTGTTTGCCTCCTACTGTGGAACCGAAAGTGTCTGAGCACATGCCCCAAATCATTGATATGATTGAGAAGATTCTTAATAATGGGTATGCCTACGATGTTGATGGGGATATATACTTTAATGTAGAAAAATTTCCAGAATATGGGAAATTATCTAATCGAGGTCTAGAAGATAATCGAGCTGGTGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTTTGGAAGTCTGCAAAGCCAGGGGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGATGGCATATCGAATGCAGTGCTATGAGTTCCACTTATCTTGGTTACACTTTTGACATCCATGGTGGAGGAATCGACCTTGTATTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCTTGTAATAAAAGTGATATTAGTGTATGGATGCACAATGGTTTTGTCACAATCGACTCTGTGAAGATGTCTAAATCTTTGGGAAACTTTTTCACAATACGGCAGGTTGTAGATGTTTATCATCCGCTGGCTTTGAGATATTTTTTGATGAGTGCCCATTATAGATCTCCTATGAACTACTCTAATATACACCTTGAAAGTGCTTCAGACCGTATTTTTTACATATATGAGACATTACATGAATGTGAAAGCTTTCTGAACCAGCATGATCAGACAGTTAGGAGGGATTCGGTCCCACAAGATACTTTGAATATTATTGATAACTTCTATGATGTTTTTCTGACCTCAATGTCTGATGATCTTCACACTCCAGTTGTGTTGGCTGGACTTTCTGATCCACTAAAATCAATTAACGACTTGCTGCATACTCGCAAGGGGAAAAAACAACAATTTCGAATAGAATCGCTTGCAGCTTTGAAGAAAAGTATTGGGGACGTCCTTACTGTTGTAGGTCTTATGCCTTCAAGTTACTATGAAGTTTTGCAGCAGCTTAAGAAAAAAGCTCTTAAGCGTGCAAACTTGACAGAAGATCAAATCTTGCAGAAGATTGAAGAACGGGCCGCTGCTAGAATACAAAAGGAGTATGCGAAATCCGATGCCGTAAGGAAAGATTTGGCTGTTCTTGGTATTGCTCTTATGGATAGTCCAAATGGCACAACTTGGAGACCTACCATTCCTCTTGCGCTTCAAGAGCAGCAGATTGATGCACGCTGA 1206 0.4038 MVTLNCLPPTVEPKVSEHMPQIIDMIEKILNNGYAYDVDGDIYFNVEKFPEYGKLSNRGLEDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWESPWGPGRPGWHIECSAMSSTYLGYTFDIHGGGIDLVFPHHENEIAQSCAACNKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMSAHYRSPMNYSNIHLESASDRIFYIYETLHECESFLNQHDQTVRRDSVPQDTLNIIDNFYDVFLTSMSDDLHTPVVLAGLSDPLKSINDLLHTRKGKKQQFRIESLAALKKSIGDVLTVVGLMPSSYYEVLQQLKKKALKRANLTEDQILQKIEERAAARIQKEYAKSDAVRKDLAVLGIALMDSPNGTTWRPTIPLALQEQQIDAR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02935 401 SUPERFAMILY Nucleotidylyl transferase 3 210 - -
Car05g02935 401 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 239 387 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Car05g02935 401 Gene3D HUPs 1 205 IPR014729 -
Car05g02935 401 PANTHER CYSTEINYL-TRNA SYNTHETASE 1 397 IPR024909 -
Car05g02935 401 PRINTS Cysteinyl-tRNA synthetase signature 91 109 IPR024909 -
Car05g02935 401 PRINTS Cysteinyl-tRNA synthetase signature 122 143 IPR024909 -
Car05g02935 401 TIGRFAM cysS: cysteine--tRNA ligase 1 386 IPR015803 GO:0004817|GO:0005524|GO:0006423
Car05g02935 401 Pfam tRNA synthetases class I (C) catalytic domain 1 212 IPR032678 -
Car05g02935 401 Gene3D - 206 387 - -
Car05g02935 401 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 1 397 - -
Car05g02935 401 Coils Coil 322 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02935 Car-Chr5 74343693 74348281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02935 K01883 - gmx:100786700 736.873