Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02921 ATGTCGGTTTCATCGAAAGGAGATTCGGTTCAAATTAGAGAGGTTTGGAACGATAATCTCGATGAAGAATTTGCATTGATCCGTGAAATCGTTGACCAATTCAACTTTATAGCTATGGATACTGAGTTTCCTGGAGTTGTTCTTCGTCCTGTAGGGAATTTCAAAAACATCAACGATTATAACTACCAGACTTTGAAGGATAACGTTGATATGTTGAAGCTGATTCAGTTAGGTCTCACTTTCTCTGATGAGAACGGAAACCTACCTAACTGTGGTACTGATAGTTCCTGCATCTGGCAATTCAACTTCCGGGAATTCAACGTCAGCGAAGACATCTTTGCCAGCGATTCTATCGAGCTGTTGCGTCAATGTGGAATTGATTTCAAGAAGAACAGCGAGAAAGGGATTGACGTGAACCGATTTGCCGAGCTTCTCATGTCGTCGGGGATTGTGTTGAATGATGATGTGCATTGGGTTACTTTCCATAGTGGTTATGATTTTGGTTACCTTCTGAAGCTGTTGACGTGCCGAACTTTGCCAGACACACAAACTGGATTTTTCGACATGATCAAGATTTATTTTCCTGTGGTGTATGATATCAAGCATTTGATGAAGTTCTGTAACAATCTTCACGGTGGTTTGAACAAGCTTGCGGAGTTGTTGGATGTTGAAAGGGTTGGTGTTTGCCATCAAGCTGGATCAGATAGTTTACTCACTGCTTGTACATTTAGGAAGTTGAGGGATGCATTCTTCAATGGCGAAACAGAGAAATATTCTGGTGTGTTGTATGGTTTAGGTGTTGAGAAAACAGACTAA 816 0.4105 MSVSSKGDSVQIREVWNDNLDEEFALIREIVDQFNFIAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPNCGTDSSCIWQFNFREFNVSEDIFASDSIELLRQCGIDFKKNSEKGIDVNRFAELLMSSGIVLNDDVHWVTFHSGYDFGYLLKLLTCRTLPDTQTGFFDMIKIYFPVVYDIKHLMKFCNNLHGGLNKLAELLDVERVGVCHQAGSDSLLTACTFRKLRDAFFNGETEKYSGVLYGLGVEKTD 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02921 271 Gene3D - 2 269 IPR036397 GO:0003676
Car05g02921 271 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 1 270 - -
Car05g02921 271 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 270 IPR039637 GO:0004535|GO:0030014
Car05g02921 271 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Car05g02921 271 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02921 Car-Chr5 74161613 74163324 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02921 K12581 - gmx:100798365 513.842